| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1637246 | 103 (1.100) | 7 (0.080) | 6/244 | NT | 6.4% | coding (654/741 nt) | pdxJ | pyridoxine 5'‑phosphate synthase |
| ? | NC_002947 | = 1637264 | 103 (1.130) | coding (672/741 nt) | pdxJ | pyridoxine 5'‑phosphate synthase | |||||
CCACCGAAGTGGCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1637095‑1637246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gg‑cATGCGCCACCAGCGCATGGCCAATGTTCAACTCATTGATACCCTTGATCGCCGCCACCGCCTCGACGTTGTGGTAATGCAGCCCGTGACCGGCATTGACGATCAGCCCATGCCCCACGCCAAACGCCACACCCTCGACGATCCGCTTGA < NC_002947/1637264‑1637116 CCACCGAAGTGGCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTG < 2:1615897/150‑1 CACCGAAGTGGCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG < 1:332502/150‑1 ACCGAAGTGGCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG‑C < 2:525599/150‑1 GGCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGCGGCGGGGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG‑CAgatcgga > 2:1638924/1‑143 GCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG < 1:1132221/140‑1 GCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG > 2:1132221/1‑140 AAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTG < 2:67623/135‑1 AAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTG > 1:67623/1‑135 CAAGCGGATCGTCGAGGGTGTGGGGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGAGCACGGGGAGCAATGAGTTGAACATTGGCCATGCGCCACCAGCGCATGG < 1:1136875/150‑1 GTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCCACCAGCGCATGG < 1:129174/126‑1 GTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGGCCATGCGCCACCAGCGCATGG > 2:129174/1‑126 CACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG‑CATGCGCCACCAGCGCATGGCCAAT < 1:2331193/78‑1 CACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG‑CATGCGCCACCAGCGCATGGCCAAT > 2:2331193/1‑78 GCGATCAAGGGTATCAATGAGTTGAACATTGG‑CATGCGCCACCAGCGCATGGCCAATGTTCAA > 2:688675/1‑63 GCGATCAAGGGTATCAATGAGTTGAACATTGG‑CATGCGCCACCAGCGCATGGCCAATGTTCAA < 1:688675/63‑1 GG‑CATGCGCCACCAGCGCATGGCCAATGTTCAACTCATTGATACCCTTGATCGCCGCCACCGCCTCGACGTTGTGGTAATGCAGCCCGTGACCGGCATTGACGATCAGCCCATGCCCCACGCCAAACGCCACACCCTCGACGATCCGCTT < 1:1503247/150‑1 CATGCGCCACCAGCGCATGGCCAATGTTCAACTCATTGATACCCTTGATCGCCGCCACCGCCTCGACGTTGTGGTAATGCAGCCCGTGACCGGCATTGACGATCAGCCCATGCCCCACGCCAAACGCCACACCCTCGACGATCCGCTTGA < 1:934044/150‑1 CATGCGCCACCAGCGCATGGCCAATGTTCAACTCATTGATACCCTTGATCGCCGCCACCGCCTCGACGTTGTGGTAATGCAGCCCGTGACCGGCATTGACGATCAGCCCATGCCCCACGCCAAACGCCACACCCTCGACGATCCGCTTGA < 1:238322/150‑1 CCACCGAAGTGGCTGAAGAGCTCAAGCGGATCGTCGAGGGTGTGGCGTTTGGCGTGGGGCATGGGCTGATCGTCAATGCCGGTCACGGGCTGCATTACCACAACGTCGAGGCGGTGGCGGCGATCAAGGGTATCAATGAGTTGAACATTGG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1637095‑1637246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gg‑cATGCGCCACCAGCGCATGGCCAATGTTCAACTCATTGATACCCTTGATCGCCGCCACCGCCTCGACGTTGTGGTAATGCAGCCCGTGACCGGCATTGACGATCAGCCCATGCCCCACGCCAAACGCCACACCCTCGACGATCCGCTTGA < NC_002947/1637264‑1637116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |