New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1792255 | 71 (0.760) | 4 (0.050) | 4/238 | NT | 5.3% | coding (863/1359 nt) | rseP | regulatory intramembrane protein RIP |
? | NC_002947 | = 1792285 | 76 (0.860) | coding (893/1359 nt) | rseP | regulatory intramembrane protein RIP |
GGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTG‑‑‑‑‑‑‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1792145‑1792255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actg‑‑‑‑‑‑‑ccTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGCCAG < NC_002947/1792285‑1792137 GGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTG‑‑‑‑‑‑‑CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCC < 1:1605577/150‑1 GGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTGCCGGTGACCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAG < 2:1256214/150‑1 TCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTG‑‑‑‑‑‑‑CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGG > 1:1854177/1‑108 TCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTG‑‑‑‑‑‑‑CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGG < 2:1854177/108‑1 ACTG‑‑‑‑‑‑‑CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGA < 2:838133/150‑1 ACTG‑‑‑‑‑‑‑CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGAGACCTCGCGCACCACTAAAAGCACCACCGTTTCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGA > 1:1485102/1‑150 G‑‑‑‑‑‑‑CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGCC > 1:572606/1‑150 CCTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGCCA > 1:50457/1‑150 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGCCAG > 1:1303803/1‑150 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGCCAG > 1:384767/1‑150 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGA < 1:237502/145‑1 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGA > 2:237502/1‑145 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAAT > 1:712909/1‑137 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAAT < 2:712909/137‑1 CTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGGCACTGCCAAATCATCCAGAGCCAG > 2:452224/1‑150 GGATGATTTGGCAGTGACCGAATGGCAGCAGGTAGTCGACCGCGTGCGCGCCCGCCCGGATGCCAAGGTCGTGGTGCGAGTGGAGCGCGACGGCGCTGCCCTGGAACTG‑‑‑‑‑‑‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1792145‑1792255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actg‑‑‑‑‑‑‑ccTTGCCCTCCCCCTTGCGGGCCAAGGTCACCGGCAGTTCCAGGGCAGCGCCGTCGCGCTCCACTCGCACCACGACCTTGGCATCCGGGCGGGCGCGCACGCGGTCGACTACCTGCTGCCATTCGGTCACTGCCAAATCATCCAGAGCCAG < NC_002947/1792285‑1792137 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |