New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2298415 | 103 (1.100) | 5 (0.060) | 5/232 | NT | 5.1% | coding (1750/3645 nt) | sbcC | exonuclease subunit SbcC |
? | NC_002947 | = 2298442 | 91 (1.050) | coding (1723/3645 nt) | sbcC | exonuclease subunit SbcC |
GCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2298258‑2298415 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgttgACGCTCACCCGTCAACTGCTGGAACGCCAACGCCTGGCACGCAACACCAGCGTCGAAGAACTGCGTAACCAACTGCGTGACGGCGAACCCTGCCCGGTCTGTGGCAGCGCCGAACACCCCTTCCATCAGCCAGAAGCGCTGCTGCAGAG < NC_002947/2298442‑2298294 GCGGCGTGCTCTTCGGCCTGTTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCC > 1:1208020/1‑150 GGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAG < 2:28995/150‑1 CGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGC > 1:2370561/1‑150 TGCTCGTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAGGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGT < 1:2151597/150‑1 GCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTT < 2:1396808/150‑1 GCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTT < 1:2410301/150‑1 ccCTTCGGACTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTG < 1:2178979/148‑1 CTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTG < 2:1124697/150‑1 TGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTGACGCTCACCC > 2:128265/1‑150 GGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGT < 2:2016108/122‑1 GGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGT > 1:2016108/1‑122 TCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTGACGCTCACCCGTCAACTGCTGGAACGCCA < 1:1569053/150‑1 GCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTT < 2:1260398/117‑1 GCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTT > 1:1260398/1‑117 AGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTGACGCTCACCCGTCAACTGCTGGAACGCCAACGCC < 1:128265/150‑1 GTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTGACGCTCACCCGTCAACTGCTGGAACGCCAA < 1:2032702/120‑1 GTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTGACGCTCACCCGTCAACTGCTGGAACGCCAA > 2:2032702/1‑120 GGCGTTGACGCTCACCCGTCAACTGCTGGAACGCCAACGCCTGGCACGCAACACCAGCGTCGAAGAACTGCGTAACCAACTGCGTGACGGCGAACCCTGCCCGGTCTGTGGCAGCGCCGAACACCCCTTCCATCAGCCAGAAGCGCTGCT < 2:112984/150‑1 GCGTTGACGCTCACCCGTCAACTGCTGGAACGCCAACGCCTGGCACGCAACACCAGCGTCGAAGAACTGCGTAACCAACTGCGTGACGGCGAACCCTGCCCGGTCTGTGGCAGCGCCGAACACCCCTTCCATCAGCCAGAAGCGCTGCTG > 1:1650938/1‑150 GTTGACGCTCACCCGTCAACTGCTGGAACGCCAACGCCTGGCACGCAACACCAGCGTCGAAGAACTGCGTAACCAACTGCGTGACGGCGAACCCTGCCCGGTCTGTGGCAGCGCCGAACACCCCTTCCATCAGCCAGAAGCGCTGCTGCA > 1:1456309/1‑150 GACGCTCACCCGTCAACTGCTGGAACGCCAACGCCTGGCACGCAACACCAGCGTCGAAGAACTGCGTAACCAACTGCGTGACGGCGAACCCTGCCCGGTCTGTGGCAGCGCCGAACACCCCTTCCATCAGCCAGAAGCGCTGCTGCAGAG > 2:2332607/1‑150 GCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGGGTTCGCCGTCACGCAGTTGGTTACGCAGTTCTTCGACGCTGGTGTTGCGTGCCAGGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2298258‑2298415 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgttgACGCTCACCCGTCAACTGCTGGAACGCCAACGCCTGGCACGCAACACCAGCGTCGAAGAACTGCGTAACCAACTGCGTGACGGCGAACCCTGCCCGGTCTGTGGCAGCGCCGAACACCCCTTCCATCAGCCAGAAGCGCTGCTGCAGAG < NC_002947/2298442‑2298294 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |