New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2516982 =	96 (1.030)	6 (0.070)	6/236	NT	6.3%	coding (300/864 nt)	PP_2210	LysR family transcriptional regulator
	?	NC_002947	2517002 =	88 (1.000)					coding (320/864 nt)	PP_2210	LysR family transcriptional regulator

AGCCCCTTGCGCGGCTCGATTTCGGTCAGCACCGCCACGTCGGCATGCTCGCCGAGCAGCGCAGCCAAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGG‑‑CATGACCCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2517137‑2516982 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgatgcTGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGCCGACGTGGCGGTGCTGACCGAAATCGAGCCGCGCAAGGGGCT  >  NC_002947/2517002‑2517137                                                                                                                                                                                                                                                                                                        acCCCCTTCCGCGGCTTGATTTCGGTCAGCACCGCCACGTCGGCATGCTCGCCGAGCAGCGCAGCCAAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGG‑‑CATGACC                                                                                                                                                <  2:1714514/148‑1    CCCTTGCGCGGCTCGATTTCGGTCAGCACCGCCACGTCGGCATGCTCGCCGAGCAGCGCAGCCAAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGG‑‑CATGACCCGA                                                                                                                                             >  2:2206793/1‑150     CCTTGCGCGGCTCGATTTCGGTCAGCACCGCCACGTCGGCATGCTCGCCGAGCAGCGCAGCCAAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGG‑‑CATGACCCGAT                                                                                                                                            >  1:650515/1‑150       TTGCGCCGCTCGATTTCGGTCAGCACCGCCACGTCGGCATGCTCGCCGAGCAGCGCAGCCAAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGG‑‑CATGACCCGATGC                                                                                                                                          <  1:1218047/150‑1                                                                   AAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGGGTCATG‑‑CCGATGCTGGCGCTGC                                                                                                                                 >  1:162456/1‑99                                                                   AAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGGGTCATG‑‑CCGATGCTGGCGCTGC                                                                                                                                 <  2:162456/99‑1                                                                           CTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGGGTCATG‑‑CCGATGCTGGCGCTGCT                                                                                                                                >  1:1043233/1‑92                                                                           CTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGGGTCATG‑‑CCGATGCTGGCGCTGCT                                                                                                                                <  2:1043233/92‑1                                                                                                                                      CCAGCATCGG‑‑CATGACCCGATGCGGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGCCGACGTGGCGGTGCTGACCGAAATCGAGCCGCG           >  2:1770088/1‑150                                                                                                                                               G‑‑CATGACCCGATGCGGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGCCGACGTGGCGGTGCTGACCGAAATCGAGCCGCGCAAGGGGCT  <  1:1770088/150‑1                                                                                                                                                        CCGATGCTGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGC                                            <  1:1631196/101‑1                                                                                                                                                        CCGATGCTGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGC                                            <  1:1631798/101‑1                                                                                                                                                        CCGATGCTGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGC                                            >  2:1631196/1‑101                                                                                                                                                        CCGATGCTGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGC                                            >  2:1631798/1‑101                                                                                                                                                                                                                                                                                                        AGCCCCTTGCGCGGCTCGATTTCGGTCAGCACCGCCACGTCGGCATGCTCGCCGAGCAGCGCAGCCAAGGTCTCCTGAGCATTGCCCAGGCGCAAGTTGACGGTGACACCAGGGTACCGCTCACGCAGCAGCGCCAGCATCGG‑‑CATGACCCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2517137‑2516982 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgatgcTGGCGCTGCTGCGTGAGCGGTACCCTGGTGTCACCGTCAACTTGCGCCTGGGCAATGCTCAGGAGACCTTGGCTGCGCTGCTCGGCGAGCATGCCGACGTGGCGGTGCTGACCGAAATCGAGCCGCGCAAGGGGCT  >  NC_002947/2517002‑2517137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.