New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3296420 = | 74 (0.790) | 4 (0.050) | 4/230 | NT | 5.3% | intergenic (‑246/+6) | PP_2896/PP_2898 | hypothetical protein/hypothetical protein |
? | NC_002947 | 3296484 = | 74 (0.860) | coding (434/492 nt) | PP_2898 | hypothetical protein |
GCCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3296575‑3296420 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCC > NC_002947/3296484‑3296630 GCCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGA < 1:1053972/150‑1 CCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGT < 2:2057451/150‑1 TTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGG > 1:2137090/1‑81 TTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGG < 2:2137090/81‑1 ACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAA < 1:1738858/93‑1 ACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAA > 2:1738858/1‑93 CCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTC > 2:971365/1‑150 TACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGT < 1:971365/150‑1 TTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAAGCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCGGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTATGATTCAGTGGCTGTGCCTG > 2:948362/1‑150 TGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGG < 1:606037/150‑1 AGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTC < 2:2312339/150‑1 GGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCG < 1:271290/150‑1 GTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCC < 1:351854/150‑1 GCCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3296575‑3296420 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCC > NC_002947/3296484‑3296630 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |