New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3296420 =74 (0.790)4 (0.050) 4/230 NT 5.3% intergenic (‑246/+6) PP_2896/PP_2898 hypothetical protein/hypothetical protein
?NC_002947 3296484 = 74 (0.860)coding (434/492 nt) PP_2898 hypothetical protein

TGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCC  >  NC_002947/3296335‑3296630
                                                                                                                                                     |                                                                                                                                                  
tGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTgg                                                                                                                                                    >  1:1964199/1‑150 (MQ=255)
tGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTgg                                                                                                                                                    >  1:1275240/1‑150 (MQ=255)
    gcTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGGACAGCACCCCTCAATCGCAAGGAACACTAATGAATAAAGTTGCGCTACCCAGATAGGCTTGAGGGGTGgcgcg                                                                                                                                                >  1:2377167/1‑150 (MQ=255)
        tAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGGCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATg                                                                                                                                            >  2:898424/1‑150 (MQ=255)
        tAGGAAAAGACGTGGAAATCTGGCTGAGCCTACTGGTAACCTGTAGGGGCGCTCGCGAAGATGTGCAGTGGGTACAGCACCCATCAATCGCACGGGAAGCTGCTAAGAAAAATAACGCTACCAAGATAGGATTGAGGAGTGGCGCGCATg                                                                                                                                            >  2:2333483/1‑150 (MQ=255)
             aaTGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGGAGCTGCTCAGCAAACTGGCGCTACACAGATAGGCTTGAGGGGTGGCGCGCATGCTcgg                                                                                                                                       >  1:669229/1‑150 (MQ=255)
               tGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTcggcg                                                                                                                                     <  2:763716/150‑1 (MQ=255)
                 gCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACTCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGACACGCTTGAGGTAAGACGCGCATGCTCggcggc                                                                                                                                   >  1:122721/1‑150 (MQ=255)
                  cGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTcggcg                                                                                                                                     >  2:2386546/1‑147 (MQ=255)
                  cGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTAAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTcggcg                                                                                                                                     <  1:2386546/147‑1 (MQ=255)
                    tGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAAc                                                                                                                                <  2:1275240/150‑1 (MQ=255)
                    tGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAAc                                                                                                                                >  2:1641766/1‑150 (MQ=255)
                        cATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgc                                                                                                                            <  2:2197490/150‑1 (MQ=255)
                         aTCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGGTATTCGCATGCTCGGCGGCAACGTgcg                                                                                                                           >  1:1817856/1‑150 (MQ=255)
                            tGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACTGGTAGCTGCTCAGCAAACTGGCGCTACCCATTTAGGCGTTAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGACa                                                                                                                        >  2:2343424/1‑150 (MQ=255)
                            tGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCCAGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCa                                                                                                                        >  1:1946624/1‑150 (MQ=255)
                               cTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATc                                                                                                                     <  2:618966/150‑1 (MQ=255)
                                     ctcctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGGGCAGGTTAGTCTCGGCGGCAACGTGCGCCAATCGACcag                                                                                                               >  2:1380371/1‑150 (MQ=255)
                                      tcctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTTGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagc                                                                                                              >  1:1592838/1‑150 (MQ=255)
                                      tcctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagc                                                                                                              >  2:1005403/1‑150 (MQ=255)
                                        ctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagcag                                                                                                            <  1:2343424/150‑1 (MQ=255)
                                         tGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGCGGGTAAAGCACCCATCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAgg                                                                                                           >  1:1617606/1‑150 (MQ=255)
                                              tCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAg                                                                                                      <  2:369562/150‑1 (MQ=255)
                                                cTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAgcg                                                                                                    >  1:1746774/1‑150 (MQ=255)
                                                  gTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGcgcg                                                                                                  >  2:231800/1‑150 (MQ=255)
                                                     ggggCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGCGCGCCAATCGACCAGCAGGCACAGCGCGTGc                                                                                               >  2:2379829/1‑150 (MQ=255)
                                                       ggCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCaa                                                                                             <  2:2377167/150‑1 (MQ=255)
                                                       ggCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCAAAGCGCTTGCaa                                                                                             >  2:60656/1‑150 (MQ=255)
                                                            tCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCt                                                                                        >  2:1268495/1‑150 (MQ=255)
                                                                gatgatGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGcc                                                                                    >  1:182410/1‑150 (MQ=255)
                                                                   gatgTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGtt                                                                                 <  2:1964199/150‑1 (MQ=255)
                                                                      gtgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTgcg                                                                              >  2:944781/1‑150 (MQ=255)
                                                                       tgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTgcgc                                                                             >  2:1791976/1‑150 (MQ=255)
                                                                       tgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCCAGCCGTTgcac                                                                             <  1:562643/150‑3 (MQ=255)
                                                                       tgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGCGCAACGGCCAGCCGTTgcac                                                                             <  1:1080519/150‑3 (MQ=255)
                                                                       tgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGCGCAACGGCCAGCCGTTgcac                                                                             <  2:1897493/150‑3 (MQ=255)
                                                                         cAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGCGGGGTGGCGCGCATGCGCGGCGGCAACGTGCGCCAGTCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTg                                                                           >  2:266799/1‑150 (MQ=255)
                                                                          aGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTgg                                                                          >  1:2200612/1‑150 (MQ=255)
                                                                          aGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTgg                                                                          >  1:2183948/1‑150 (MQ=255)
                                                                          aGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTgg                                                                          >  1:1008309/1‑150 (MQ=255)
                                                                           gTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCGAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGc                                                                         >  2:199278/1‑150 (MQ=255)
                                                                           gTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgc                                                                                                                            <  2:162337/99‑1 (MQ=255)
                                                                           gTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgc                                                                                                                            >  1:1342407/1‑99 (MQ=255)
                                                                           gTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgc                                                                                                                            <  2:1342407/99‑1 (MQ=255)
                                                                           gTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgc                                                                                                                            >  1:162337/1‑99 (MQ=255)
                                                                               gTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGAt                                                                     >  1:1424976/1‑150 (MQ=255)
                                                                                tACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATg                                                                    <  1:2342138/150‑1 (MQ=255)
                                                                                tACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATg                                                                    >  1:1064349/1‑150 (MQ=255)
                                                                                      acccctcaagcctatctgggtagcgccagtttgctgagcagctacccgtgcgattgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCaa                                                                                                                       <  1:1738858‑M2/30‑1 (MQ=255)
                                                                                      acccctcaagcctatctgggtagcgccagtttgctgagcagctacccgtgcgattgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCaa                                                                                                                       >  2:1738858‑M2/64‑93 (MQ=255)
                                                                                      ACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTgg                                                              <  2:2057451‑M1/150‑1 (MQ=255)
                                                                                        ccctcaagcctatctgggtagcgccagtttgctgagcagctacccgtgcgattgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTc                                                            >  2:971365‑M2/62‑150 (MQ=255)
                                                                                        CCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCaa                                                                                                                                 >  1:2137090‑M1/1‑81 (MQ=255)
                                                                                        CCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCaa                                                                                                                                 <  2:2137090‑M1/81‑1 (MQ=255)
                                                                                           TCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGc                                                         <  1:1053972‑M1/150‑1 (MQ=255)
                                                                                                  cACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCCAGCCGTTgc                                                                               >  1:177928/1‑121 (MQ=255)
                                                                                                  cACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCCAGCCGTTgc                                                                               <  2:177928/121‑1 (MQ=255)
                                                                                                     gggTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTggcgg                                               <  2:1156203/150‑1 (MQ=255)
                                                                                                          gctgctCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGAGGATGCACGGCTGCAACGCGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTa                                          <  1:2379829/150‑1 (MQ=255)
                                                                                                           ctgctCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTAGGGCTGGCGGATTGCCTGGGCTGCAAAGTGGCGGCGGTAc                                         >  2:2092452/1‑150 (MQ=255)
                                                                                                            tgctCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGTCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACa                                        >  1:1135379/1‑150 (MQ=255)
                                                                                                            tgctCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACa                                        >  2:835911/1‑150 (MQ=255)
                                                                                                             gctCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAg                                       >  1:86901/1‑150 (MQ=255)
                                                                                                               tCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagcag                                                                                                            >  1:2189262/1‑79 (MQ=255)
                                                                                                               tCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagcag                                                                                                            <  2:2189262/79‑1 (MQ=255)
                                                                                                                 aGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGTCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTAcc                                   <  2:1746774/150‑1 (MQ=255)
                                                                                                                 aGCAAACTGGCGCTACCCAGATAGGCATGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGGGGTGCAGTAcc                                   >  2:1126766/1‑150 (MQ=255)
                                                                                                                   cAAACTGGCGCTACCCAGATAGGCGTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGGTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTAcccg                                 >  2:434780/1‑148 (MQ=255)
                                                                                                                    aaaCTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTgg                                <  2:1617606/150‑1 (MQ=255)
                                                                                                                     aaCTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGtt                                                                                 <  1:1986806/100‑1 (MQ=255)
                                                                                                                     aaCTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGtt                                                                                 >  2:1986806/1‑100 (MQ=255)
                                                                                                                       cTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTc                             <  1:1268495/150‑1 (MQ=255)
                                                                                                                          gcgcTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTgg                                <  2:1571653/144‑1 (MQ=255)
                                                                                                                          gcgcTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTgg                                >  1:1571653/1‑144 (MQ=255)
                                                                                                                          gcgcTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGa                          <  2:2200612/150‑1 (MQ=255)
                                                                                                                          gcgcTACACAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGa                          <  2:669229/150‑1 (MQ=255)
                                                                                                                               aCCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGcc                                                                                    >  2:2133996/1‑87 (MQ=255)
                                                                                                                               aCCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGcc                                                                                    <  1:2133996/87‑1 (MQ=255)
                                                                                                                               aCCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAg                     >  1:1551320/1‑150 (MQ=255)
                                                                                                                                tacccgtgcgattgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGt                    <  1:971365‑M2/129‑1 (MQ=255)
                                                                                                                                cccAGATAGTCTTGAGGGGTGGCGCTCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGt                    <  1:2333483/150‑1 (MQ=255)
                                                                                                                                cccAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGt                    <  2:1817856/150‑1 (MQ=255)
                                                                                                                                 ccAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGt                                                    <  1:270182/117‑1 (MQ=255)
                                                                                                                                 ccAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACAAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTTCGCTGGCCGATGACCTGGTCGGCAAAGt                                                    >  2:270182/1‑117 (MQ=255)
                                                                                                                                  cAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTgg                  >  1:1030602/1‑150 (MQ=255)
                                                                                                                                      tAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCtgt              <  1:835911/150‑1 (MQ=255)
                                                                                                                                         gCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGcac                                                                                                        >  1:1227713/1‑57 (MQ=255)
                                                                                                                                         gCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGcc           >  2:351854/1‑150 (MQ=255)
                                                                                                                                         gCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGcc           >  1:2312339/1‑150 (MQ=255)
                                                                                                                                         gCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGcc           <  2:1008309/150‑1 (MQ=255)
                                                                                                                                         gCTTGAGGGCTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGcac                                                                                                        <  2:1227713/57‑1 (MQ=255)
                                                                                                                                           ttgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAAGCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCGGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTATGATTCAGTGGCTGTGCCTg         >  2:948362‑M2/11‑150 (MQ=255)
                                                                                                                                            tgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTgg        <  1:606037‑M2/141‑1 (MQ=255)
                                                                                                                                              aggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTc      <  2:2312339‑M2/143‑1 (MQ=255)
                                                                                                                                               ggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCg     <  1:271290‑M2/144‑1 (MQ=255)
                                                                                                                                                  gtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGcc  <  1:351854‑M2/147‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
TGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCC  >  NC_002947/3296335‑3296630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.