New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3403942 = | 71 (0.760) | 5 (0.060) | 3/238 | NT | 7.2% | coding (317/360 nt) | PP_3014 | hypothetical protein |
? | NC_002947 | 3403962 = | 62 (0.700) | coding (337/360 nt) | PP_3014 | hypothetical protein |
AGCTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3404096‑3403942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG > NC_002947/3403962‑3404108 AGCTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTC > 2:26747/1‑150 CTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGC < 1:1267069/150‑1 ATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCta < 1:442584/150‑3 ATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA < 1:2310467/150‑1 AGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCCGACAGCCTGGCG‑ACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGA < 1:1134867/150‑1 GAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA < 1:2094185/118‑1 GAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA > 2:2094185/1‑118 GTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA > 1:1950598/1‑95 GTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA < 2:1950598/95‑1 GGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA > 1:1486221/1‑91 GGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCA < 2:1486221/91‑1 AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCGACAAGTT‑ACGCCAGGCTGTCAGGCAATG < 2:1000554/78‑1 AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCGACAAGTT‑ACGCCAGGCTGTCAGGCAATG < 2:1000616/78‑1 AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCGACAAGTT‑ACGCCAGGCTGTCAGGCAATG > 1:1000616/1‑78 AACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑ACAAGTTACGCCAGGCTGTCAGGCAATG > 1:1000554/1‑78 CGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAG < 1:1671242/150‑1 GCCAGGCTGTCAGGCAATGCCTGGCTTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGC > 2:1625075/1‑150 ctGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG > 2:11205/3‑150 AGCTATCCGAGCCGAATGGAGGCGCAGGTGAAGTGCGAACATTTGAACAAGCGGGATGAGTTGGGGTAACTGCAGGCGATCGGGGCGGCACAACCCGCTCGGGTCACTGATTCAATCCAGGCATTGCCTGACAGCCTGGCG‑TAACTTGTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3404096‑3403942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTGTGCCGCCCCGATCGCCTGCAGTTACCCCAACTCATCCCGCTTGTTCAAATGTTCGCACTTCACCTGCGCCTCCATTCGGCTCGGATAGCTGGGTTTGAGCCG > NC_002947/3403962‑3404108 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |