New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3487390 =	98 (1.050)	5 (0.060)	5/238	NT	5.7%	coding (664/1344 nt)	PP_3093	hypothetical protein
	?	NC_002947	3487454 =	73 (0.820)					coding (600/1344 nt)	PP_3093	hypothetical protein

GCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3487543‑3487390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGACCAGCAGTACGACGTTC  >  NC_002947/3487454‑3487601                                                                                                                                                                                                                                                                                                                  GCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GC                                                                                                                                                          <  2:823546/150‑1   CAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCG                                                                                                                                                        >  2:2054638/1‑150   CAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCG                                                                                                                                                        >  2:2166952/1‑150   CAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCG                                                                                                                                                        >  2:2348007/1‑150    AAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GTCGG                                                                                                                                                       >  1:1748269/1‑150                                                                                        ATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGG                                                                                                      <  1:1374295/115‑1                                                                                        ATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGG                                                                                                      >  2:1374295/1‑115                                                                                               GCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGT                                                                       >  1:1568689/1‑139                                                                                               GCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGT                                                                       <  2:1568689/139‑1                                                                                                            CCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGT                                                 >  1:2278704/1‑150                                                                                                                                                          GGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGACCAGCAGTACGACGTT   >  1:787134/1‑150                                                                                                                                                          GGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGACCAGCAGTACGACGTT   >  2:799557/1‑150                                                                                                                                                           GCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGACCAGCAGTACGACGTTC  >  1:1227397/1‑150                                                                                                                                                                                                                                                                                                                  GCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGCTTTCCG‑‑GCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3487543‑3487390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGACCAGCAGTACGACGTTC  >  NC_002947/3487454‑3487601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.