New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3487390 =98 (1.050)5 (0.060) 5/238 NT 5.7% coding (664/1344 nt) PP_3093 hypothetical protein
?NC_002947 3487454 = 73 (0.820)coding (600/1344 nt) PP_3093 hypothetical protein

Only 100 of 108 total aligned reads displayed.

CAGGAACAGGTACAGGCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGT  >  NC_002947/3487241‑3487532
                                                                                                                                                     |                                                                                                                                                 
cAGGAACAGGTACATGCGCCCGGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACTGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCgcggcg                                                                                                                                                   <  2:134838/150‑1 (MQ=255)
 gaacgtcgtactgctggtcgacggtgacagcctcgacggttacagccactgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgc                                                                                                                                                  >  1:1227397‑M1/149‑150 (MQ=255)
  aacgtcgtactgctggtcgacggtgacagcctcgacggttacagccactgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgcc                                                                                                                                                 >  2:799557‑M1/148‑150 (MQ=255)
      cAGGTACAGGCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCgccggc‑‑c                                                                                                                                           <  1:1151866/150‑1 (MQ=255)
       tggTACAGGCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCgccggc‑‑cg                                                                                                                                          <  1:2354348/149‑1 (MQ=255)
         gTACAGGCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGa                                                                                                                                        >  2:35996/1‑150 (MQ=255)
              ggCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAgcg                                                                                                                                   >  2:749043/1‑150 (MQ=255)
                    ctGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGc                                                                                                                             <  2:104614/150‑1 (MQ=255)
                      gggTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGctc                                                                                                                           <  1:2317290/150‑1 (MQ=255)
                      gggTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGctc                                                                                                                           <  1:2316747/150‑1 (MQ=255)
                        gTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCtt                                                                                                                         <  1:430772/150‑1 (MQ=255)
                        gTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGACTTGCTCtt                                                                                                                         <  1:749043/150‑1 (MQ=255)
                         tGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTg                                                                                                                        <  2:1296065/150‑1 (MQ=255)
                           cAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGc                                                                                                                      <  1:1889525/150‑1 (MQ=255)
                             ggCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGGCGACGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCt                                                                                                                    >  1:2090290/1‑150 (MQ=255)
                              gcgcGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTg                                                                                                                   >  2:2028294/1‑150 (MQ=255)
                                gcgGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCa                                                                                                                 >  1:377090/1‑150 (MQ=255)
                                        gCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑Cg                                                                                                        >  1:1428918/1‑150 (MQ=255)
                                         ccAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGa                                                                                                       >  1:1462374/1‑150 (MQ=255)
                                         ccAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGa                                                                                                       >  2:845119/1‑150 (MQ=255)
                                           aGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGc                                                                                                     >  1:1758393/1‑150 (MQ=255)
                                             tAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCCGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAg                                                                                                   <  2:2013360/150‑1 (MQ=255)
                                              aGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAgg                                                                                                  <  1:384758/150‑1 (MQ=255)
                                                actgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattGCCGGCATCGGCAAACGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAgg                                                                                                  >  1:2278704‑M1/102‑150 (MQ=255)
                                                  gAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGtt                                                                                              >  1:1953139/1‑150 (MQ=255)
                                                     ccAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGc                                                                                           >  2:1072364/1‑150 (MQ=255)
                                                        gCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGa                                                                                        >  2:1338484/1‑150 (MQ=255)
                                                             gggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCg                                                                                   <  1:845119/150‑1 (MQ=255)
                                                              ggTGGGCACGGTTGACCGTGTTCAGCAGCTAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGttt                                                                                             >  1:565977/1‑139 (MQ=255)
                                                              ggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGttt                                                                                             <  2:565977/139‑1 (MQ=255)
                                                              ggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCgg                                                                                  >  2:923865/1‑150 (MQ=255)
                                                              ggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGACACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCgg                                                                                  <  1:392022/150‑1 (MQ=255)
                                                                  ggCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAAt                                                                              <  2:1758393/150‑1 (MQ=255)
                                                                   gCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATg                                                                             >  2:946716/1‑150 (MQ=255)
                                                                   gCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATg                                                                             >  2:818228/1‑150 (MQ=255)
                                                                   gCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATg                                                                             >  2:818217/1‑150 (MQ=255)
                                                                   gCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCAGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATg                                                                             >  2:1326945/1‑150 (MQ=255)
                                                                   gCACGGTTGACCGTGTTCAGCAGCCAGAACAGAGGGCCATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCCTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATg                                                                             >  1:1774121/1‑150 (MQ=255)
                                                                    cACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATgg                                                                            >  2:1187434/1‑150 (MQ=255)
                                                                      acgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGc                                                                                     <  2:1568689‑M1/60‑1 (MQ=255)
                                                                        gTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAg                                                                                                   <  1:1907965/123‑1 (MQ=255)
                                                                            aCCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTgg                                                                    >  2:2075364/1‑150 (MQ=255)
                                                                             ccGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGc                                                                   >  2:383370/1‑150 (MQ=255)
                                                                               gtgtTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTg                                                                 <  1:35996/150‑1 (MQ=255)
                                                                                tgtTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGTGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGc                                                                >  1:1273170/1‑150 (MQ=255)
                                                                                  ttCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGccc                                                              <  1:2028294/150‑1 (MQ=255)
                                                                                      gcagcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGt                                                          <  1:923865/150‑1 (MQ=255)
                                                                                      gcagcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCCTAG‑CTTCCGCATGCGCGATCAGGCGTTTGCCGATGCCGGCAATGGTCGCGTGGCTGCCCAGGt                                                          <  2:1165605/150‑1 (MQ=255)
                                                                                        agcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGa                                                                                                       >  1:2240091/1‑103 (MQ=255)
                                                                                        agcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGa                                                                                                       <  2:2240091/103‑1 (MQ=255)
                                                                                        agcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGc                                                        >  2:820138/1‑150 (MQ=255)
                                                                                             gAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGACGGGCGC‑CGAGCAGGCGTGTACTGAGACCTGCAAGGGTCTCGTGGCTGCCCAGGTGCAAggt                                                   <  2:24941/150‑1 (MQ=255)
                                                                                              aaCAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCg                                                                       <  1:2399057/129‑1 (MQ=255)
                                                                                              aaCAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCg                                                                       >  2:2399057/1‑129 (MQ=255)
                                                                                                cAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggtggg                                                <  1:2115926/150‑1 (MQ=255)
                                                                                                  gggTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggtggggt                                              <  1:1656250/150‑1 (MQ=255)
                                                                                                  gggTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggtggggt                                              <  1:963413/150‑1 (MQ=255)
                                                                                                  gggTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGAGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCGGCCGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggtggggt                                              <  2:828725/150‑1 (MQ=255)
                                                                                                   ggTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggtggggtg                                             <  1:2268715/150‑1 (MQ=255)
                                                                                                    gTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggtggggtgg                                            >  2:1695319/1‑150 (MQ=255)
                                                                                                     ccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAAt                                                                              >  2:1374295‑M1/49‑115 (MQ=255)
                                                                                                     ccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAAt                                                                              <  1:1374295‑M1/67‑1 (MQ=255)
                                                                                                          tCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTgg                                                                    >  1:1035298/1‑120 (MQ=255)
                                                                                                          tCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTgg                                                                    <  2:1035298/120‑1 (MQ=255)
                                                                                                          tCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGaaa                                      <  1:1187434/150‑1 (MQ=255)
                                                                                                           cGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGgcg                                                                                                            <  2:2380669/80‑1 (MQ=255)
                                                                                                           cGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGgcg                                                                                                            >  1:2380669/1‑80 (MQ=255)
                                                                                                             cTGGAGCCGAACTCGGCGATCTGGACGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGCGCAACGTGGGGTGGAAGAAATGc                                   >  2:179149/1‑150 (MQ=255)
                                                                                                              tGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCg                                  >  1:522509/1‑150 (MQ=255)
                                                                                                              tGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCg                                  <  1:1790596/150‑1 (MQ=255)
                                                                                                                  gCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCa                                                                                                    >  1:1051585/1‑80 (MQ=255)
                                                                                                                  gCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCa                                                                                                    <  2:1051585/80‑1 (MQ=255)
                                                                                                                   ccGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCa                             >  1:1649100/1‑150 (MQ=255)
                                                                                                                   ccGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGAAGGGGTTTGcc                                                                                          >  1:42392/1‑89 (MQ=255)
                                                                                                                    cGAGCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCaa                            <  1:233206/150‑1 (MQ=255)
                                                                                                                    cGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCaa                            <  1:818228/150‑1 (MQ=255)
                                                                                                                    cGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCaa                            <  1:818217/150‑1 (MQ=255)
                                                                                                                     gAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCaa                                                                               >  2:681641/1‑98 (MQ=255)
                                                                                                                     gAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCaa                                                                               <  1:681641/98‑1 (MQ=255)
                                                                                                                     gAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAg                           >  2:718289/1‑150 (MQ=255)
                                                                                                                      aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGcc                                                                                          >  2:293013/1‑86 (MQ=255)
                                                                                                                      aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGcc                                                                                          <  1:293013/86‑1 (MQ=255)
                                                                                                                      aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCgg                                 >  1:203182/1‑143 (MQ=255)
                                                                                                                      aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCgg                                 <  2:203182/143‑1 (MQ=255)
                                                                                                                      aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAgg                          <  1:820138/150‑1 (MQ=255)
                                                                                                                        cTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGtt                        <  2:1953139/150‑1 (MQ=255)
                                                                                                                        cTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGtt                        <  2:1462374/150‑1 (MQ=255)
                                                                                                                         tCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTg                                                                                                                        >  2:2264594/1‑54 (MQ=255)
                                                                                                                         tCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTg                                                                                                                        <  1:2264594/54‑1 (MQ=255)
                                                                                                                         tCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTg                       >  1:1000021/1‑150 (MQ=255)
                                                                                                                              gATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAAcc                  >  1:2348007/1‑150 (MQ=255)
                                                                                                                                  tGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGccc              >  1:1539712/1‑150 (MQ=255)
                                                                                                                                          gcgcTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGtt      <  1:1679344/150‑1 (MQ=255)
                                                                                                                                           cgcTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTg     <  1:354695/150‑1 (MQ=255)
                                                                                                                                              tCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCaa                                                                               <  2:1502478/73‑1 (MQ=255)
                                                                                                                                              tCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCaa                                                                               >  1:1502478/1‑73 (MQ=255)
                                                                                                                                              tCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAATGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCgt  >  1:980573/1‑150 (MQ=255)
                                                                                                                                              tCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCgt  >  1:1832254/1‑150 (MQ=255)
                                                                                                                                              tCGCGGCGCCGGC‑‑CAGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAg                                                     <  1:1365043/99‑1 (MQ=255)
                                                                                                                                              tCGCGGCGCCGGC‑‑CAGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAg                                                     >  2:1365043/1‑99 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CAGGAACAGGTACAGGCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGC‑‑CGGAAAGCGCCTTGCTCTTGGCCTGCAGGGCGC‑CGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGT  >  NC_002947/3487241‑3487532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.