New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3712440 = | 83 (0.890) | 8 (0.090) | 6/238 | NT | 9.6% | coding (599/990 nt) | paaA | ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha |
? | NC_002947 | 3712481 = | 72 (0.810) | coding (558/990 nt) | paaA | ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha |
CGTCAACCAGGTGGTACTGCAGCGCACCTCTTACGGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3712592‑3712440 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgg‑tCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGACGATGGCGGCGCCGTCCACCAGCCAGCCCACAGCGCCCA > NC_002947/3712481‑3712629 CGTCAACCAGGTGGTACTGCAGCGCACCTCTTACGGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACAT > 1:277636/1‑150 TCAACCAGGTGGTACTGCAGCGCACCTCTTACGGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG < 2:502385/150‑1 TGGTACTGCAGCGCACCTCTTACGGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG > 2:901315/1‑141 TGGTACTGCAGCGCACCTCTTACGGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG < 1:901315/141‑1 GGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACA < 1:754146/115‑1 GGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACA > 2:754146/1‑115 CATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGGTTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGGAGGGGCCGAAAGAGGTGCGCTGCAGTACCACCTGGTTGA > 2:779741/1‑150 CATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGGTTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCA > 2:1679775/1‑88 CATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGGTTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCA < 1:1679775/88‑1 CATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCT < 2:224901/79‑1 CATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCT > 1:224901/1‑79 ATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGACG > 2:2267578/1‑150 TGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCA < 2:2448589/132‑1 TGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCA > 1:2448589/1‑132 TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGACGATGGCGGCGCCGTCCACCAGCCAGCCCACAGCGCCCA > 2:667220/1‑150 TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGC < 1:889923/95‑1 TCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGC > 2:889923/1‑95 CGTCAACCAGGTGGTACTGCAGCGCACCTCTTACGGCCCCTACTCCCGCGCGATGATCCGTATCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGCTACGAAATGCTCCTGACCATGATGCGCCAGGGCACCCAAGCCCAGCGCGACATGG‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3712592‑3712440 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgg‑tCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGACGATGGCGGCGCCGTCCACCAGCCAGCCCACAGCGCCCA > NC_002947/3712481‑3712629 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |