New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3944242	104 (1.110)	6 (0.070)	5/234	NT	5.7%	coding (198/507 nt)	PP_5605	hypothetical protein
	?	NC_002947	= 3944252	103 (1.180)					coding (188/507 nt)	PP_5605	hypothetical protein

GACCTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3944086‑3944242 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacaggCCTCCCGCGACCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCAGTTCATCGGCCGCATGGGTGA  <  NC_002947/3944252‑3944105                                                                                                                                                                                                                                                                                                                   GACCTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGG                                                                                                                                                             <  1:1166449/150‑1   CCTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGA                                                                                                                                                           >  2:1577396/1‑150   CCTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGA                                                                                                                                                           >  1:2186413/1‑150    CTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAA                                                                                                                                                          >  1:1365028/1‑150    CTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAA                                                                                                                                                          >  2:438486/1‑150      GCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACA                                                                                                                                                        <  2:840629/150‑1       CAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAG                                                                                                                                                       <  1:851497/150‑1        AGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGG                                                                                                                                                      <  2:1394298/150‑1        AGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGG                                                                                                                                                      >  1:2097730/1‑150                    gcaccacTGCGGCAAATAAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGGCCTCCCGCGACC                                                                                                                                          >  2:98925/8‑150                         CATGCGGCCGGTGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGGCCTCCCGCGACCTGTTC                                                                                                                                     <  2:66088/150‑1                             CGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGGCCTCCCGCGACCTGTTCCCAA                                                                                                                                 <  1:300707/150‑1                                                                                                                                       TCCATTGCTGGGTTGGGAACAGGTCGCGGGAGGCCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCA                       >  1:98925/1‑150                                                                                                                                               TGGGTTGGGAACAGGTCGCGGGAGGCCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGC                                         <  2:1871368/124‑1                                                                                                                                               TGGGTTGGGAACAGGTCGCGGGAGGCCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGC                                         >  1:1871368/1‑124                                                                                                                                                       GAACAGGCCTCCCGCGACCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCAGTTCATCGGCCGCATG       <  2:2203951/150‑1                                                                                                                                                        AACAGGCCTCCCGCGACCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCAGTTCATCGGCCGCATGG      <  2:1794491/150‑1                                                                                                                                                        AACAGGCCTCCCGCGACCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCAGTTCATCGGCCGCATGG      <  1:1719786/150‑1                                                                                                                                                            GGCCTCCCGCGACCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCAGTTCATCGGCCGCATGGGTGA  <  2:2215099/150‑1                                                                                                                                                                                                                                                                                                                   GACCTGCAGGTCGTCGCGGTCACCCATGCGGCCGATGAACTGGAAAGGCAGTTCCGGGGCCGTCGGGGCCGCGGCGACGACAGGTGCGGTCATCACGGGTTGTTCGGTGACCGTGGCCAGGGTTTTGGGTTGGGTCCATTGCTGGGTTGGGAACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3944086‑3944242 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacaggCCTCCCGCGACCTGTTCCCAACCCAGCAATGGACCCAACCCAAAACCCTGGCCACGGTCACCGAACAACCCGTGATGACCGCACCTGTCGTCGCCGCGGCCCCGACGGCCCCGGAACTGCCTTTCCAGTTCATCGGCCGCATGGGTGA  <  NC_002947/3944252‑3944105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.