New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4071847 | 87 (0.930) | 5 (0.050) | 5/244 | NT | 5.5% | coding (356/3099 nt) | mdtB | multidrug transporter membrane protein |
? | NC_002947 | = 4071885 | 88 (0.970) | coding (318/3099 nt) | mdtB | multidrug transporter membrane protein |
GATTTGCGCAAGCTTTTGCGCCACGCGGGTATCGACCAGGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4071696‑4071847 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACAGG‑TGCAGGCCGCGATCAACGCCGCCAGCAACCTGCTGCC < NC_002947/4071885‑4071844 GATTTGCGCAAGCTTTTGCGCCACGCGGGTATCGACCAGGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGG < 1:2061148/150‑1 ATTTGCGCAAGCTTTTGCGCCACGCGGGTATCGACCAGGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGC < 2:2122171/150‑1 TTTGCGCAAGCTTTTGCGCCACGCGGGTATCGACCAGGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCA > 1:2446503/1‑150 GCCACGCGGGTATCGACCAGGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCAACAGG‑TGCAGGCCGCGA > 2:945466/1‑150 GACCATGTCTTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCAGCAGGTTGCAGGCCGCGACCAACGCCGCCAG < 1:1696255/150‑1 GGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGG > 1:330777/1‑112 GGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGG < 2:330777/112‑1 CGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCAACAGG‑TGCAGGCCGCGATCAACGCCGCCAGCAACCTGCT < 1:945466/150‑1 TTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCAACAGG‑TGCAGGCCGCGATCAACGCCGCCAGCAACCTGCTGC < 2:2215483/150‑1 TGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCAACAGG‑TGCAGGCCGCGATCAACGCCGCCAGCAACCTGCTGCC < 1:835969/150‑1 GATTTGCGCAAGCTTTTGCGCCACGCGGGTATCGACCAGGTCGTTGAGCTTGGGCAGCGGCATGGTCTTGCTGGAGATGGCCAGGGTCAGCACCGGGGTGTCGGCCGGGTTGACCTTGTTGTACACCGGCGGTGCCGGCAGGTCACTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4071696‑4071847 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACAGG‑TGCAGGCCGCGATCAACGCCGCCAGCAACCTGCTGCC < NC_002947/4071885‑4071844 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |