New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4261430	105 (1.130)	6 (0.070)	5/240	NT	5.6%	coding (1376/2460 nt)	PP_3734	ABC transporter permease
	?	NC_002947	= 4261448	102 (1.140)					coding (1358/2460 nt)	PP_3734	ABC transporter permease

TGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4261277‑4261430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgACAGCCGCCAGCAGCTGCCAGCCCTGAGCCTGGCGTTGGTCGCCCTTTTGCTGGCCCTGGCTGCCAGTGTTGGCGTGGGCAGCATGACCGAGGGTTTTCGCAAGACGTTTGTCGGTTGGCTTGACCTGCGCCTCTCCGCCGACCTGTAT  <  NC_002947/4261448‑4261300                                                                                                                                                                                                                                                                                                                 gGGGCCGTGGCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGAGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGG                                                                                                                                                           <  2:1079750/149‑1  GGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGG                                                                                                                                                          <  1:903987/150‑1                         TACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGACAGCCGCCAGCAGCTGCCA                                                                                                                                   <  1:1989129/150‑1                            AGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCCGCCAGCAGCTGCCAGCC                                                                                                                                <  2:2291605/150‑1                                                                                          GCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGACAGCCGCCAGCAGCTGCCAGCC                                                                                                                                >  1:2008322/1‑88                                                                                          GCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGACAGCCGCCAGCAGCTGCCAGCC                                                                                                                                <  2:2008322/88‑1                                                                                                                                           GCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCCTGAGCCTGGCGTTGGTCGCCCTTTTGCTGGCCCTGGCTGCCAGTGTTGGCGTGGGCAGCATGACCGAGGGTTTTCGCAAGA                                              <  1:1396565/121‑1                                                                                                                                           GCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCCTGAGCCTGGCGTTGGTCGCCCTTTTGCTGGCCCTGGCTGCCAGTGTTGGCGTGGGCAGCATGACCGAGGGTTTTCGCAAGA                                              >  2:1396565/1‑121                                                                                                                                                       GCTGACAGCCGCCAGCAGCTGCCAGCCCTGAGCCTGGCGTTGGTCGCCCTTTTGCTGGCCCTGGCTGCCAGTGTTGGCGTGGGCAGCATGACCGAGGGTTTTCGCAAGACGTTTGTCGGTTGGCTTGACCTGCGCCTCTCCGCCGCCCTG     >  2:54427/1‑150                                                                                                                                                          GACAGCCGCCAGCAGCTGCCAGCCCTGAGCCTGGCGTTGGTCGCCCTTTTGCTGGCCCTGGCTGCCAGTGTTGGCGTGGGCAGCATGACCGAGGGTTTTCGCAAGACGTTTGTCGGTTGGCTTGACCTGCGCCTCTCCGCCAACCTGTAT  >  2:1623981/1‑150                                                                                                                                                                                                                                                                                                                 TGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4261277‑4261430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgACAGCCGCCAGCAGCTGCCAGCCCTGAGCCTGGCGTTGGTCGCCCTTTTGCTGGCCCTGGCTGCCAGTGTTGGCGTGGGCAGCATGACCGAGGGTTTTCGCAAGACGTTTGTCGGTTGGCTTGACCTGCGCCTCTCCGCCGACCTGTAT  <  NC_002947/4261448‑4261300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.