New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4261430105 (1.130)6 (0.070) 5/240 NT 5.6% coding (1376/2460 nt) PP_3734 ABC transporter permease
?NC_002947 = 4261448 102 (1.140)coding (1358/2460 nt) PP_3734 ABC transporter permease

Only 100 of 127 total aligned reads displayed.

GTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAG  >  NC_002947/4261283‑4261578
                                                                                                                                                    |                                                                                                                                                     
gtgtCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGc                                                                                                                                                     >  1:617862/1‑150 (MQ=255)
gtgtCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGc                                                                                                                                                     >  2:1750540/1‑150 (MQ=255)
   tcgcgcgGGTTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAgc                                                                                                                                                  >  2:1912698/4‑150 (MQ=255)
     ccGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTCTCAGCCAGTGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAgctg                                                                                                                                                >  2:1883404/1‑150 (MQ=255)
      cgcgGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAgctgc                                                                                                                                               <  2:2179695/150‑1 (MQ=255)
       gcgGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAgctgct                                                                                                                                              <  2:501912/150‑1 (MQ=255)
         ggggTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTgg                                                                                                                                            <  1:359017/150‑1 (MQ=255)
           ggTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTggcg                                                                                                                                          <  2:1429355/150‑1 (MQ=255)
            gTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTggcgg                                                                                                                                         >  1:410599/1‑150 (MQ=255)
                 aTACAGGTTGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTc                                                                                                                                    >  2:1623981‑M2/1‑149 (MQ=255)
                  tACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGacagccgccagcagctgcca                                                                                                                                   <  1:1989129‑M1/150‑21 (MQ=255)
                    cAGGGCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTcagc                                                                                                                                 >  2:54427‑M2/1‑146 (MQ=255)
                     aGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGgcagccgccagcagctgccagcc                                                                                                                                <  2:2291605‑M1/150‑24 (MQ=255)
                       gTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCAc                                                                                                                              <  1:1028929/150‑1 (MQ=255)
                         cggcggAGAGGCGCAGGTCAAGCCAACCGACAACCGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGa                                                                                                                            <  1:2356866/150‑1 (MQ=255)
                                gagGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTg                                                                                                                     >  2:648536/1‑150 (MQ=255)
                                   gcgcAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTgcgc                                                                                                                  >  2:2047782/1‑150 (MQ=255)
                                     gcAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACACCTCCATCA‑AATGTCGACGTCAACACTGGCAGCCAGTGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCa                                                                                                                >  1:1002949/1‑150 (MQ=255)
                                      cAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCGACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCaa                                                                                                               <  2:459070/150‑1 (MQ=255)
                                      cAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCaa                                                                                                               <  1:2047782/150‑1 (MQ=255)
                                         gTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATgg                                                                                                            >  2:242371/1‑150 (MQ=255)
                                          tCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGc                                                                                                           >  2:2027697/1‑150 (MQ=255)
                                            aaGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCg                                                                                                         <  1:2027697/150‑1 (MQ=255)
                                             aGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCgg                                                                                                        <  1:1981256/150‑1 (MQ=255)
                                              gCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGt                                                                                                       >  1:1446820/1‑150 (MQ=255)
                                               ccAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTg                                                                                                      <  1:1912698/150‑1 (MQ=255)
                                               ccAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTg                                                                                                      <  2:318983/150‑1 (MQ=255)
                                               ccAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTg                                                                                                      <  2:678494/150‑1 (MQ=255)
                                               ccAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTg                                                                                                      <  2:727818/150‑1 (MQ=255)
                                                    cGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCATCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAac                                                                                                 >  1:1879320/1‑150 (MQ=255)
                                                    cGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAac                                                                                                 >  2:1066620/1‑150 (MQ=255)
                                                    cGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAac                                                                                                 >  2:134100/1‑150 (MQ=255)
                                                        aaaCGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGcc                                                                                                          >  2:418000/1‑137 (MQ=255)
                                                             tCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGACAGCCGCCAGCAGCTGCcagccctgagcctggc                                                                                                                     <  1:1396565‑M2/121‑17 (MQ=255)
                                                                   gAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTg                                                                                                      <  2:789354/130‑1 (MQ=255)
                                                                   gAAAAC‑CCTCGGTCATGCTGCCCACGCCAACAATGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTg                                                                                                      >  1:789354/1‑130 (MQ=255)
                                                                       aC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGt                                                                                                       >  1:671084/1‑125 (MQ=255)
                                                                          ccTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTgg                                                                                                                                                      >  1:448485/1‑76 (MQ=255)
                                                                          ccTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTgg                                                                                                                                                      <  2:448485/76‑1 (MQ=255)
                                                                          ccTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTa                                                                           >  2:781354/1‑150 (MQ=255)
                                                                           cTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTAc                                                                          >  1:1283189/1‑150 (MQ=255)
                                                                            tCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTAcc                                                                         >  1:1723913/1‑150 (MQ=255)
                                                                             cGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCt                                                                        <  2:835610/150‑1 (MQ=255)
                                                                               gTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGa                                                                      <  1:242371/150‑1 (MQ=255)
                                                                               gTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGa                                                                      >  1:2213605/1‑150 (MQ=255)
                                                                                tCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGa                                                                      >  2:1498631/1‑149 (MQ=255)
                                                                                  aTGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCg                                                                   >  2:1857366/1‑150 (MQ=255)
                                                                                  aTGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCg                                                                   >  1:1820194/1‑150 (MQ=255)
                                                                                   tgctgcCCACGCCAACACTGGCAGCCAGGGCCCGCCAAAGGGCGCCCAACGCCAGGCTCAGAGATGGCAGCTGCTGGCGGCTGTCAGACACGCACCATTGCCCCAATGACCGCTCCCAAC‑GACGCGCCAGCCAGGCCAATCCCTGaccca                                                                  >  2:118807/1‑146 (MQ=255)
                                                                                   tgctgcCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCGTTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGa                                                                  >  2:1303221/1‑150 (MQ=255)
                                                                                    gctgcCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGacagccgccagcagctgccagcc                                                                                                                                <  2:2008322‑M1/88‑24 (MQ=255)
                                                                                    gctgcCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGTTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAg                                                                 >  1:1930575/1‑150 (MQ=255)
                                                                                      tgcCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCa                                                               >  1:1836433/1‑150 (MQ=255)
                                                                                             gCCAACCCTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGAAGCCGGCACCAACGAACCATTGCGCCCATGGCCAGT‑TCAACAGTAAACCCAGTTAGGCCAGTACCTGATCGACCAAGGCCgg                                                        <  1:1125561/150‑1 (MQ=255)
                                                                                               cAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCTAGTACCTGATCGAGCAAGGCCGGCa                                                      >  2:2312898/1‑150 (MQ=255)
                                                                                                aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGcc                                                          <  2:809677/145‑1 (MQ=255)
                                                                                                aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGcc                                                          >  1:809677/1‑145 (MQ=255)
                                                                                                aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCaa                                                     <  2:2125132/150‑1 (MQ=255)
                                                                                                aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCaa                                                     <  1:2063654/150‑1 (MQ=255)
                                                                                                    cTGGCAGCCAGGCCCAGCAAAAGGGCGACCACCGCCAGGCTCAGGGCTGGCAGCTGCTGGCGCCTGTCCGCCACGAACCATTGCGCCACGGGCCGGTGGCAAC‑GCCGCGCCAGCCAGGCCAGTACCTGCTCGACCAAGGCCGGCAAcacc                                                 <  2:18325/150‑3 (MQ=255)
                                                                                                     tGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAAcagca                                                <  2:1002949/150‑1 (MQ=255)
                                                                                                     tGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAAcagca                                                >  1:2229468/1‑150 (MQ=255)
                                                                                                       gCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACagcagc                                              <  2:1446820/150‑1 (MQ=255)
                                                                                                       gCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACagcagc                                              <  2:557504/150‑1 (MQ=255)
                                                                                                       gCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCAATACGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACagcagc                                              <  1:625986/150‑1 (MQ=255)
                                                                                                           ccAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGcgccg                                          >  2:1037948/1‑150 (MQ=255)
                                                                                                           ccAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGcgccg                                          >  1:506810/1‑150 (MQ=255)
                                                                                                                gCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGa                                                                  >  1:1415143/1‑121 (MQ=255)
                                                                                                                gCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGa                                                                  <  2:1415143/121‑1 (MQ=255)
                                                                                                                gCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCAGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCgccgccgcc                                     >  1:1877701/1‑150 (MQ=255)
                                                                                                                 ccAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCca                                    >  2:2146123/1‑150 (MQ=255)
                                                                                                                  cAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTgc                                                                                                                    >  1:1774124/1‑70 (MQ=255)
                                                                                                                  cAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTgc                                                                                                                    <  2:1774124/70‑1 (MQ=255)
                                                                                                                   aGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCcagc                                  >  1:1545702/1‑150 (MQ=255)
                                                                                                                     cAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCcagcag                                <  2:1684968/150‑1 (MQ=255)
                                                                                                                         aGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCgcca                                                                                       >  1:1309974/1‑91 (MQ=255)
                                                                                                                         aGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCgcca                                                                                       <  2:1309974/91‑1 (MQ=255)
                                                                                                                          gggCGACCACCGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAAcc                           >  1:1058616/1‑150 (MQ=255)
                                                                                                                              gACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGc                       >  1:347048/1‑150 (MQ=255)
                                                                                                                              gACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGc                       <  1:648536/150‑1 (MQ=255)
                                                                                                                               aCCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGcc                      >  1:375623/1‑150 (MQ=255)
                                                                                                                                 cAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCgg                                                        >  2:711987/1‑114 (MQ=255)
                                                                                                                                 cAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGcccg                    >  2:425105/1‑148 (MQ=255)
                                                                                                                                 cAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAg                    >  2:1178758/1‑150 (MQ=255)
                                                                                                                                   aCGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCa                  <  1:1054845/150‑1 (MQ=255)
                                                                                                                                     gCCAGGCTCAGGGCTGgcagctgctggcggctgtcagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagcatgaccgagggttttcgcaaga                                              >  2:1396565‑M1/1‑16 (MQ=255)
                                                                                                                                     gCCAGGCTCAGGGCTGgcagctgctggcggctgtcagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagcatgaccgagggttttcgcaaga                                              <  1:1396565‑M1/121‑106 (MQ=255)
                                                                                                                                     gCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATg                <  1:445101/150‑1 (MQ=255)
                                                                                                                                     gCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATg                >  2:376466/1‑150 (MQ=255)
                                                                                                                                        aGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCg             >  2:1938663/1‑150 (MQ=255)
                                                                                                                                            tCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAAca         >  1:1513098/1‑149 (MQ=255)
                                                                                                                                              aGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGa                                                                  >  1:1764358/1‑91 (MQ=255)
                                                                                                                                              aGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGa                                                                  <  2:1764358/91‑1 (MQ=255)
                                                                                                                                                ggCTGGCAGCTGCTGGCGGCTGTcagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagc                                                                    >  1:2008322‑M2/1‑23 (MQ=255)
                                                                                                                                                ggCTGGCAGCTGCTGGCGGCTGTcagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagc                                                                    <  2:2008322‑M2/88‑66 (MQ=255)
                                                                                                                                                ggCTGGCAGCTGCTGGCGGCTGCcagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagcatgaccgagggttttcgcaagacgtttgtcggttggcttgacctgcgcctctccgccgacct      <  2:2291605‑M2/150‑128 (MQ=255)
                                                                                                                                                 gCTGacagccgccagcagctgccagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagcatgaccgagggttttcgcaagacgtttgtcggttggcttgacctgcgcctctccgccgccctg     >  2:54427‑M1/1‑4 (MQ=255)
                                                                                                                                                  cTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTaa   <  1:1255732/150‑1 (MQ=255)
                                                                                                                                                   tGGCAGCTGCTGGCGGCTGTcagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagcatgaccgagggttttcgcaagacgtttgtcggttggcttgacctgcgcctctccgccgacctgta   <  1:1989129‑M2/150‑131 (MQ=255)
                                                                                                                                                    gacagccgccagcagctgccagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggcgtgggcagcatgaccgagggttttcgcaagacgtttgtcggttggcttgacctgcgcctctccgccaacctgtat  >  2:1623981‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAAC‑CCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAAC‑GACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAG  >  NC_002947/4261283‑4261578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.