| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4575566 = | 83 (0.890) | 5 (0.060) | 5/230 | NT | 5.7% | intergenic (+40/‑82) | glgX/ybhP‑II | glycogen debranching enzyme/phosphohydrolase |
| ? | NC_002947 | 4575613 = | 88 (1.030) | intergenic (+87/‑35) | glgX/ybhP‑II | glycogen debranching enzyme/phosphohydrolase | |||||
TCAGTACCCGCAGGCGTTTCACGGCCGGGGCCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4575723‑4575566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtttggcgGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCTTCAACCGG > NC_002947/4575613‑4575761 TCAGTACCCGCAGGCGTTTCACGGCCGGGGCCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGG < 2:654572/150‑1TCAGTACCCGCAGGCGTTTCACGGCCGGGGCCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGG < 1:1835537/150‑1 TACCCGCAGGCGTTTCACGGCCGGGGCCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTT < 1:2148811/150‑1 CCGCAGGCGTTTCACGGCCGGGGCCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGC < 1:349057/150‑1 CCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCG < 2:1120115/119‑1 CCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCG > 1:1120115/1‑119 ACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGG > 1:1555226/1‑101 ACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGG < 2:1555226/101‑1 CCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAAC > 1:1727042/1‑144 CCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAAC < 2:1727042/144‑1 AAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTC < 1:1030385/108‑1 AAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTC > 2:1030385/1‑108 CCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCGTCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTG > 2:1550873/1‑150 GGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCGCAAGTGCTTCACCGCCT < 2:2112247/150‑1 GGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCT < 2:1711562/150‑1 TGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTGTGCGATGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATCACCATCAGGGCTTCACCGCCTTCAA > 1:1731659/1‑150 GCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCTTCAACC > 1:2402998/1‑150 GCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCTTCAACC > 2:1355542/1‑150 GCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGG < 1:253224/117‑1 GCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGG > 2:253224/1‑117 CGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCTTCAACCG > 1:1810611/1‑150 GGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCTTCAACCGG < 1:1338876/150‑1 TCAGTACCCGCAGGCGTTTCACGGCCGGGGCCTGGCTGACGCTGGCGAAACCATTACTGCCGGCTTCGAGGCTCACGATTCCTCCTGAAGTTAACCCTGCCTCACTGTCGCCGCCAAACCCTGTGGGGGCCGGTACACCGTTCCCACCGGGTTTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4575723‑4575566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtttggcgGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACCGCCTTCAACCGG > NC_002947/4575613‑4575761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |