| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4577848 | 91 (0.980) | 9 (0.100) | 9/240 | NT | 9.2% | intergenic (+13/+96) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme |
| ? | NC_002947 | = 4577923 | 90 (1.000) | intergenic (+88/+21) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme | |||||
GCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4577756‑4577848‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACA < NC_002947/4577923‑4577775 GCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCTTTCGCGGGAGACCCGTTC < 1:2336547/112‑1GCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCTTTCGCGGGAGACCCGTTC > 2:2336547/1‑112 CGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGG > 2:813660/1‑89 CGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGG < 1:813660/89‑1 GTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCATGGCCGGCCCCTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCG > 2:1446157/1‑150 TGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCATGGCCGGCCCCTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGG < 1:1446157/150‑1 TGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGGAGGGG < 2:221586/150‑1 GGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGC < 2:2138193/150‑1 ATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCG < 2:2395323/150‑1 GTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG < 2:823925/111‑1 GTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG > 1:823925/1‑111 GGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATC < 2:403175/150‑1 GCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCC > 2:1289349/1‑150 GCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAA < 2:215604/128‑1 GCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAA > 1:215604/1‑128 CCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCA > 2:2195990/1‑150 CCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGCGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGGCATTGTCATCCAC > 1:171219/1‑150 CCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTG < 1:6874/142‑1 CCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTG > 2:6874/1‑142 CTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACA > 2:403052/1‑150 GCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4577756‑4577848‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACA < NC_002947/4577923‑4577775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |