| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4577861 = | 98 (1.050) | 19 (0.210) | 14/240 | NT | 17.7% | intergenic (+26/+83) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme |
| ? | NC_002947 | 4577913 = | 83 (0.930) | intergenic (+78/+31) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme | |||||
GCCACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4578014‑4577861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGA > NC_002947/4577913‑4578060 GCCACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGC < 1:2384904/150‑1 CCACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGATGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGCGTAGGAGCG > 1:749421/1‑150 CCACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGCTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCG > 2:1013572/1‑150 CACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG < 1:994128/150‑1 CACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG < 1:1802390/150‑1 CACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG < 1:2189234/150‑1 CACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG < 1:222359/150‑1 CGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGT < 1:1443417/150‑1 TTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAG > 2:300221/1‑150 TGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCC > 1:896945/1‑150 TTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGAT > 2:2350860/1‑150 CCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAACGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGAAGGTTCAGGGCCAGCGATAATGGCTGCCCGT > 1:1078394/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTG > 1:1278386/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTG > 1:1277454/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTG > 1:1272607/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTG > 1:1100230/1‑150 CGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGG < 2:1100230/150‑1 CTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGG > 2:1864300/1‑150 TACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCC < 2:1272607/150‑1 TACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCC < 2:1277454/150‑1 TACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCC < 2:1278386/150‑1 AGGCACCGCACCCGGCGGTGACCCGCGTAGGAACGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGA < 1:1349054/86‑1 AGGCACCGCACCCGGCGGTGACCCGCGTAGGAACGGGTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGA > 2:1349054/1‑86 CACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCGATCAGGCGGGCTTCATGATCAACACTCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGT < 1:611615/150‑1 CGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGG > 1:2284462/1‑110 CGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGG < 2:2284462/110‑1 CACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACCCTCCCCACGGCGACAATTTCATCGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTG < 1:1864300/150‑1 GTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGA < 1:1064188/150‑1 GTCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGAAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGA < 2:1078394/150‑1 GCCACGGGCAGCCATTATCGCTGGCCCTGAACCTGCCGCCGTTGGGGGTGTTGATCATGAAGCCCGCCTGATCGGTTGGCTGTACTGGCCCTTTCGCGGGAGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4578014‑4577861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtCT‑CCCGCGAAAGGGCCAGTACAGCCAACCGATCAGGCGGGCTTCATGATCAACACCCCCAACGGCGGCAGGTTCAGGGCCAGCGATAATGGCTGCCCGTGGCTGGCCACTTCGTCACTGGCCACCGCCCCGAGATTGCCGACATTCGA > NC_002947/4577913‑4578060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |