| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4675357 = | 63 (0.680) | 10 (0.130) | 9/204 | NT | 22.4% | intergenic (+10/+94) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase |
| ? | NC_002947 | 4675415 = | 18 (0.240) | intergenic (+68/+36) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase | |||||
TGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4675526‑4675357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcattcgcgggtaaacccgcTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCG > NC_002947/4675415‑4675560 TGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGAC < 1:228774/150‑1 CAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCA > 2:90206/1‑150 ACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 2:1941123/1‑148 ACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 1:1941123/148‑1 GTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 2:2126879/1‑145 GTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 1:2126879/145‑1 TCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAACTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGTAAACC < 2:1486197/150‑1 ATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAAC > 2:912583/1‑118 ATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAAC < 1:912583/118‑1 AACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGCCGCATTCGCGGGTAAACCCGC < 2:317880/109‑1 AACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGCCGCATTCGCGGGTAAACCCGC > 1:317880/1‑109 TGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 2:2404861/68‑1 TGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 1:2404861/1‑68 ACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGG < 1:1572529/85‑1 ACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGG > 2:1572529/1‑85 ctGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCG > 1:1512302/3‑150 CCGNGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCG > 2:1500226/1‑150 CCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGGTCAACTTCACCCATGACGCAAACTTGTCGACAAACGCCTGCAAGAACGGTCG > 1:603798/1‑150 CGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTACAACTGCACCCAAGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGC > 2:521611/1‑150 GAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGNGTC < 2:1512302/150‑1 GAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGC < 1:1757354/147‑1 GAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGC > 2:1757354/1‑147 GCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTATGTCTGCCGTGTTCATTGCCACTCGTGTCGTAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGA < 1:1486197/150‑1 ACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAAT > 2:51715/1‑150 CATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGC > 2:1586614/1‑110 CATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGC < 1:1586614/110‑1 GGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAG < 2:2189065/150‑1 GGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTG < 2:1925980/132‑1 GGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTG > 1:1925980/1‑132 GTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGC < 1:51715/150‑1 AACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCC < 2:1959367/53‑1 AACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCC > 1:1959367/1‑53 CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCGCTGTTCAACTTCGCCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTAAGCTTGCCCGAAGCGTCGAACAAGCTCGCC > 2:1323227/1‑150 CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGC < 2:1417199/108‑1 CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGC > 1:1417199/1‑108 CCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCG > 1:2317955/1‑150 CCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGA > 2:2075447/1‑120 CCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGA < 1:2075447/120‑1 TGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4675526‑4675357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcattcgcgggtaaacccgcTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCG > NC_002947/4675415‑4675560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |