New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5245672	75 (0.800)	4 (0.050)	4/236	NT	5.1%	coding (3037/3303 nt)	PP_4623	hypothetical protein
	?	NC_002947	= 5245685	78 (0.890)					coding (3024/3303 nt)	PP_4623	hypothetical protein

ATCCCCGTAGTCATCGCATAGCCGCCCGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5245517‑5245672 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcCTTGCTGTCGTTCGCGGCGGGGGTTGCAGGAACGGTGGCTTCCACGGGGGTCTTGGTGCGGCTGTTCGGTGCCGCACAGAAATACATCACCGTGCTTTCCCGGGCAGAGGTGTCGCAGCCCACGGCATTCTCGCGTGTGATCG  <  NC_002947/5245685‑5245543                                                                                                                                                                                                                                                                                                             ATCCCCGTAGTCATCGCATAGCCGCCCGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCC                                                                                                                                                       >  1:1281627/1‑150    CCCGTAGTCATCGCATAGCCGCCCGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGC                                                                                                                                                    >  2:2113716/1‑150                                                                TGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCCTTGCTGTCGTTCGCGGCGGGGGTTGCA                                                                                                                     <  1:337968/121‑1                                                                TGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCCTTGCTGTCGTTCGCGGCGGGGGTTGCA                                                                                                                     >  2:337968/1‑121                                                                                                             CCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCCTTGCTGTCGTTCGCGGCGGG                                                                                                                            >  1:2371276/1‑69                                                                                                             CCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCCTTGCTGTCGTTCGCGGCGGG                                                                                                                            <  2:2371276/69‑1                                                                                                                                                      CCGCCGCCTTGCTGTCGTTCGCGGCGGGGGTTGCAGGAACGGTGGCTTCCACGGGGGTCTTGGTGCGGCTGTTCGGTGCCGCACAGAAATACATCACCGTGCTTTCCCGGGCAGAGGTGTCGCAGCCCACGGCATTCTCGCGTGTGATCG  <  2:442381/150‑1                                                                                                                                                                                                                                                                                                             ATCCCCGTAGTCATCGCATAGCCGCCCGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5245517‑5245672 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcCTTGCTGTCGTTCGCGGCGGGGGTTGCAGGAACGGTGGCTTCCACGGGGGTCTTGGTGCGGCTGTTCGGTGCCGCACAGAAATACATCACCGTGCTTTCCCGGGCAGAGGTGTCGCAGCCCACGGCATTCTCGCGTGTGATCG  <  NC_002947/5245685‑5245543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.