New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 524567275 (0.800)4 (0.050) 4/236 NT 5.1% coding (3037/3303 nt) PP_4623 hypothetical protein
?NC_002947 = 5245685 78 (0.890)coding (3024/3303 nt) PP_4623 hypothetical protein

CGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGA  >  NC_002947/5245543‑5245831
                                                                                                                                              |                                                                                                                                                  
cGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGgcggcgg                                                                                                                                             <  2:442381‑M2/150‑8 (MQ=255)
       acGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTc                                                                                                                                      >  1:1457854/1‑150 (MQ=255)
       acGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTc                                                                                                                                      <  1:2113716/150‑1 (MQ=255)
         gcgAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGc                                                                                                                                    >  1:115749/1‑150 (MQ=255)
                tGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCt                                                                                                                             >  1:962977/1‑150 (MQ=255)
                 gCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTc                                                                                                                            <  2:962977/150‑1 (MQ=255)
                         ccgCGACACCTCTGCCCGGGAATGGACGGTGATCTATTTCTGTGCCGCACCCAACAGCCCCTCCAAGACCGCCTTGGAAGCCACTGTTCCTGCTACCCCCGCCGCGAACGGCAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGAt                                                                                                                    <  2:1092625/148‑1 (MQ=255)
                              acacCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATgg                                                                                                                  >  2:1229427/1‑147 (MQ=255)
                              acacCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATgg                                                                                                                  <  1:1229427/147‑1 (MQ=255)
                                acCTCTGCCCGGGAAAGCACGGTGGCGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCCACCCCCGCCGCGAACGTCTGCTCGGCAGCGATACGCTCGCCATCCCTCCACGCGATGGCCCCg                                                                                                             >  2:1728169/1‑150 (MQ=255)
                                  ctctGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGt                                                                                                           <  2:727041/150‑1 (MQ=255)
                                  ctctGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGt                                                                                                           <  2:1392363/150‑1 (MQ=255)
                                    ctGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGtga                                                                                                         <  1:102478/150‑1 (MQ=255)
                                    cggCCCGGGAAAGCCCGGTGATGCATTTCTGTGCGGCACCGAACAGCCGCACCAAGCCCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCACGGtga                                                                                                         <  2:679644/148‑1 (MQ=255)
                                      gCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGtgatg                                                                                                       <  2:1668340/150‑1 (MQ=255)
                                      gCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGAGGACGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGtgatg                                                                                                       >  2:204284/1‑150 (MQ=255)
                                        ccGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGaa                                                                                                     >  2:1539719/1‑150 (MQ=255)
                                         cGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAg                                                                                                    <  1:915815/150‑1 (MQ=255)
                                         cGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAg                                                                                                    >  2:2064453/1‑150 (MQ=255)
                                          gggAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAgg                                                                                                   <  1:1539719/150‑1 (MQ=255)
                                          gggAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAgg                                                                                                   >  2:174575/1‑150 (MQ=255)
                                            gAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCACATGCTCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGAc                                                                                                 <  1:145676/150‑1 (MQ=255)
                                                  aCGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGcc                                                                                           >  1:614593/1‑150 (MQ=255)
                                                    ggTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGc                                                                                         >  1:753480/1‑150 (MQ=255)
                                                    ggTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGc                                                                                         >  1:785838/1‑150 (MQ=255)
                                                    ggTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGc                                                                                         >  2:472867/1‑150 (MQ=255)
                                                       gATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGcaca                                                                                      <  2:1457854/150‑1 (MQ=255)
                                                          gTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGAt                                                                                                                    >  1:2425480/1‑117 (MQ=255)
                                                          gTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGAt                                                                                                                    <  2:2425480/117‑1 (MQ=255)
                                                           tATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAAc                                                                                  >  2:2151094/1‑150 (MQ=255)
                                                             tttCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAg                                                                                <  1:2309541/150‑1 (MQ=255)
                                                                  gtgCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGa                                                                           <  2:1536286/150‑1 (MQ=255)
                                                                   tgCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGTAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCCCAGAACACCCCGAc                                                                          >  1:742138/1‑150 (MQ=255)
                                                                      ggCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGc                                                                       >  2:910097/1‑150 (MQ=255)
                                                                         aCCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCAt                                                                    >  1:214720/1‑150 (MQ=255)
                                                                          ccGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATg                                                                   <  1:174575/150‑1 (MQ=255)
                                                                          ccGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATg                                                                   >  2:1485503/1‑150 (MQ=255)
                                                                           cGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATgg                                                                  <  1:1578319/150‑1 (MQ=255)
                                                                                   cGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACCGAAAAGCCCGACGGCCATGGCCGCcggc                                                          <  1:2157800/150‑1 (MQ=255)
                                                                                   cGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACATGCCGACGGCCAGGGCCGCcggg                                                          <  2:1845214/150‑2 (MQ=255)
                                                                                    gCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCCGGCCGCACAGAACAGCCCGACGGCCATGCCCGCcggcg                                                         >  2:369515/1‑150 (MQ=255)
                                                                                      aCCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGa                                                       >  2:1029862/1‑150 (MQ=255)
                                                                                        cAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGaaa                                                     <  1:1029862/150‑1 (MQ=255)
                                                                                        cAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGaaa                                                     >  1:777744/1‑150 (MQ=255)
                                                                                             cccccGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCa                                                <  2:777744/150‑1 (MQ=255)
                                                                                              ccccGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCAc                                               >  2:1724874/1‑150 (MQ=255)
                                                                                               cccGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACg                                              >  1:1037199/1‑150 (MQ=255)
                                                                                               cccGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACg                                              >  1:1906791/1‑150 (MQ=255)
                                                                                                cagTGGAACCCACCGTTCCTGCAACCCCCGCCGCGAACGCCAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACgg                                             >  2:2308785/3‑150 (MQ=255)
                                                                                                  gTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTg                                           >  2:296946/1‑150 (MQ=255)
                                                                                                     gAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAg                                                                                >  2:1218037/1‑110 (MQ=255)
                                                                                                     gAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAg                                                                                <  1:1218037/110‑1 (MQ=255)
                                                                                                        gCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGACCGAAGGTCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATg                                     >  1:662966/1‑150 (MQ=255)
                                                                                                        gCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATgg                                                                  >  1:601061/1‑121 (MQ=255)
                                                                                                        gCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATgg                                                                  <  2:601061/121‑1 (MQ=255)
                                                                                                           aCCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGa                                          >  1:364647/1‑142 (MQ=255)
                                                                                                           aCCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGa                                          <  2:364647/142‑1 (MQ=255)
                                                                                                           aCCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCg                                  >  1:218614/1‑150 (MQ=255)
                                                                                                              gTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGcc                               >  2:600061/1‑150 (MQ=255)
                                                                                                              gTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGcc                               >  2:1917427/1‑150 (MQ=255)
                                                                                                              gTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGcc                               >  1:273282/1‑150 (MQ=255)
                                                                                                               ttCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCTCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCa                              >  2:2188975/1‑150 (MQ=255)
                                                                                                                  tttctaCCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTa                           >  1:83022/6‑150 (MQ=255)
                                                                                                                   tGCAACCCCCGCCGCGAACGACAGCAAGgcggcgggggttgcaggaacggtggcttccacgggggtcttggtgcggctgttcggtgccgcacagaaatacatcaccgtgctttcccgggca                                                       <  1:337968‑M2/121‑94 (MQ=255)
                                                                                                                   tGCAACCCCCGCCGCGAACGACAGCAAGgcggcgggggttgcaggaacggtggcttccacgggggtcttggtgcggctgttcggtgccgcacagaaatacatcaccgtgctttcccgggca                                                       >  2:337968‑M2/1‑28 (MQ=255)
                                                                                                                    gCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACg                         >  2:1740406/1‑150 (MQ=255)
                                                                                                                     cAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGa                        <  2:214720/150‑1 (MQ=255)
                                                                                                                       aCCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATc                      <  1:2064453/150‑1 (MQ=255)
                                                                                                                       aCCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGATGGAGGAGGCAATCGCACCTGTAGGATGCCTGCCAGTACGATc                      >  2:1453819/1‑150 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGgcggcgggggttgcaggaacggtggcttccacgggggtcttggtgcgg                                                                                                    >  1:2371276‑M2/1‑21 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGgcggcgggggttgcaggaacggtggcttccacgggggtcttggtgcgg                                                                                                    <  2:2371276‑M2/69‑49 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATcccc                   >  1:1089682/1‑150 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATcccc                   <  2:614593/150‑1 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATcccc                   >  1:1091357/1‑150 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATcccc                   <  1:1358573/150‑1 (MQ=255)
                                                                                                                          cccGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCAAAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATcccc                   >  2:2239870/1‑150 (MQ=255)
                                                                                                                           ccgccgCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGAc                                                                                                 >  2:696155/1‑71 (MQ=255)
                                                                                                                           ccgccgCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGAc                                                                                                 <  1:696155/71‑1 (MQ=255)
                                                                                                                               cgcgAACGACAGCAAGGCGGCGGAACGGTCGCCATCTCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTc              <  1:2188975/150‑1 (MQ=255)
                                                                                                                                  gAACGACAGCAAGGCGGCGGAACGGTGGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTccac           <  2:1089682/150‑1 (MQ=255)
                                                                                                                                  gAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTccac           <  2:1091357/150‑1 (MQ=255)
                                                                                                                                     cGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTccaccac        <  1:472867/150‑1 (MQ=255)
                                                                                                                                        cAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCTGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCcaccaccac     >  1:1413362/1‑150 (MQ=255)
                                                                                                                                           cAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGa  <  2:1444911/150‑1 (MQ=255)
                                                                                                                                           cAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGa  <  2:273282/150‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                  
CGATCACACGCGAGAATGCCGTGGGCTGCGACACCTCTGCCCGGGAAAGCACGGTGATGTATTTCTGTGCGGCACCGAACAGCCGCACCAAGACCCCCGTGGAAGCCACCGTTCCTGCAACCCCCGCCGCGAACGACAGCAAGGCGGCGGAACGGTCGCCATCGCTCCACGCGATGGCCCCGGTGATGAAGGACCTGGCCGCACAGAACAGCCCGACGGCCATGGCCGCCGGCGGAAACGGCACGGTGAGGATGCCGGCCAGTACGATCCCCCACTCCACCACCACGGA  >  NC_002947/5245543‑5245831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.