New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5277534	99 (1.060)	8 (0.090)	8/246	NT	7.5%	coding (447/1221 nt)	PP_4652	membrane protein
	?	NC_002947	= 5277572	101 (1.100)					coding (485/1221 nt)	PP_4652	membrane protein

TCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5277420‑5277534 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGG  <  NC_002947/5277572‑5277425                                                                                                                                                                                                                                                                           TCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGT                                                                                                                   >  1:1627601/1‑150     gatTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCC                                                                                                               <  2:698296/147‑1       CTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGA                                                                                                             <  2:1627601/150‑1        TTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGTGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAG                                                                                                            <  2:1986430/150‑1                       AGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGGCCACCCAGTCGGCGCCACGATGGTCGCCGACTG                                                                                                                      >  1:628555/1‑127                       AGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGGCCACCCAGTCGGCGCCACGATGGTCGCCGACTG                                                                                                                      <  2:628555/127‑1                                      ATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGAC                                                                                                      >  1:38984/1‑126                                      ATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGAC                                                                                                      <  2:38984/126‑1                                                                                                                  CGCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGG  >  2:1185467/1‑150                                                                                                                                                                                                                                                                           TCTGGCCTTCCTGCTCGGCGCCAGCCGCTCATTCGAAATGCCGGCAACCCAGGCGCTGTTGCCCAATGTGGTACCGGCCGGGCTGTTCCCGCGGGCAGTGGCGGCGTCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5277420‑5277534 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCCCACC‑‑GCCGGCGCCACGATGGTCGCCGACTGGGTGGCCGAGGCCGACGCCGCCACTGCCCGCGGGAACAGCCCGGCCGGTACCACATTGGGCAACAGCGCCTGGGTTGCCGGCATTTCGAATGAGCGGCTGGCGCCGAGCAGGAAGG  <  NC_002947/5277572‑5277425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.