| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5333243 = | 95 (1.020) | 6 (0.070) | 5/220 | NT | 7.0% | intergenic (+27/‑216) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
| ? | NC_002947 | 5333303 = | 77 (0.940) | intergenic (+87/‑156) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein | |||||
CAGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5333404‑5333243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA > NC_002947/5333303‑5333451 CAGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTTGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCCCAGGCCTTGAAGGCGGCGTGGTTCCT > 2:839230/1‑150 gatctGATGCTAGCGGGAATCCACAGCGTTCGCACAGGCATGGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT < 1:1705829/145‑1 GGGGGGGTGCTAGCGGGAATCAACCGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT < 2:1210186/150‑1 GGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTTCTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT < 1:1968709/150‑1 GGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 1:1520938/150‑1 GGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT < 1:1527367/149‑1 GGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT > 2:1527367/1‑149 GGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGG < 2:1423481/150‑1 GGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGG < 1:69455/150‑1 GGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATGTACGGGGCTTTAGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGG > 2:1796386/1‑150 GGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGA < 1:860630/150‑1 ATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACCGGTAGCCCACAGACCTTGAAGGCGGCTTGCTTCCTGGGGGAGC < 2:627234/150‑1 ATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGC < 1:235486/150‑1 GCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGG < 1:792623/150‑1 TAGCGGGAATCCACAGCGTTCGCCAAGGTTTTTAATTTACTGTGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC < 1:412418/150‑1 TAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC < 2:595705/150‑1 TAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC > 2:1383400/1‑150 TTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGC > 1:72552/1‑96 TTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGC < 2:72552/96‑1 GTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTG < 1:1070019/77‑1 GTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTG > 2:1070019/1‑77 CGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCCGCGGGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAA > 2:1401023/1‑150 TTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGT > 1:433822/1‑150 CCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC < 2:1792408/59‑1 CCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC > 1:1792408/1‑59 CCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCC > 2:1448898/1‑150 CCACAGGTAGCCCACAGGCCGTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGatcggaa > 1:1207781/1‑143 ACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCC < 1:1448898/150‑1 GGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGC > 1:454382/1‑150 CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCTCCCTGCCATTTGCGCCAATAATA > 1:2088437/1‑134 CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGC > 2:100475/1‑150 CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATA < 2:2088437/134‑1 CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAA > 1:312322/1‑132 CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAA < 2:312322/132‑1 GTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAA < 1:1481722/73‑1 GTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAA > 2:1481722/1‑73 tttcGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTA < 2:1121139/96‑1 tttcGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTA > 1:1121139/5‑100 ttcGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCA > 1:1423450/4‑150 ttcGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCA > 2:588595/4‑150 tcGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAA < 1:588595/148‑1 GCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAA < 2:2027018/120‑1 GCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAA > 1:2027018/1‑120 CATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTCAATCCAATCCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA < 1:627234/150‑1 CATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA < 2:2112771/150‑1 CATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA < 1:1423481/150‑1 CATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA < 1:1044743/150‑1 CAGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5333404‑5333243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGA > NC_002947/5333303‑5333451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |