New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5333243 =95 (1.020)6 (0.070) 5/220 NT 7.0% intergenic (+27/‑216) gluQ/PP_5704 glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
?NC_002947 5333303 = 77 (0.940)intergenic (+87/‑156) gluQ/PP_5704 glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein

Only 100 of 126 total aligned reads displayed.

CAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTA  >  NC_002947/5333094‑5333392
                                                                                                                                                     |                                                                                                                                                     
tcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatg                                                                                                                                                       <  1:1044743‑M1/1‑1 (MQ=255)
tcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatg                                                                                                                                                       <  2:2112771‑M1/1‑1 (MQ=255)
tcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggattggattgactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatg                                                                                                                                                       <  1:627234‑M1/1‑1 (MQ=255)
    agacagacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCg                                                                                                                                                   >  2:657069/1‑150 (MQ=255)
      acagacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGcc                                                                                                                                                 >  2:1044743/1‑149 (MQ=255)
       cagacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTc                                                                                                                                                <  1:300635/150‑1 (MQ=255)
        tgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCccgcgaa                                                                                                                                               >  2:588595‑M1/142‑147 (MQ=255)
        tgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCccgcgaa                                                                                                                                               >  1:1423450‑M1/142‑147 (MQ=255)
        agacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTACCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCCCTcc                                                                                                                                               >  2:708121/1‑150 (MQ=255)
          acCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCca                                                                                                                                             <  1:657069/150‑1 (MQ=255)
                aaCTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTCCGGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGaa                                                                                                                                       <  1:1144910/150‑1 (MQ=255)
                 aCTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAAc                                                                                                                                      <  2:2009316/150‑1 (MQ=255)
                   tgctgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCa                                                                                                                                    >  1:969221/1‑150 (MQ=255)
                   tgctgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCa                                                                                                                                    <  1:1337952/150‑1 (MQ=255)
                   tgctgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGAGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCa                                                                                                                                    >  2:101510/1‑150 (MQ=255)
                        ttGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAAc                                                                                                                                      >  1:969440/1‑143 (MQ=255)
                             tattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAg                                                                                                                                          <  2:2088437‑M1/14‑1 (MQ=255)
                               ttattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGc                                                                                                                                                      <  2:2027018‑M1/2‑1 (MQ=255)
                               ttattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGc                                                                                                                                                      >  1:2027018‑M1/119‑120 (MQ=255)
                               ttattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAg                                                                                                                                          >  1:312322‑M1/119‑132 (MQ=255)
                               ttattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAg                                                                                                                                          <  2:312322‑M1/14‑1 (MQ=255)
                               cGCCGGCAGATGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGAGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCaa                                                                                                                        <  1:101510/150‑1 (MQ=255)
                                gCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAg                                                                                                                       <  2:443549/150‑1 (MQ=255)
                                   ggCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGcc                                                                                                                    >  1:1708855/1‑150 (MQ=255)
                                              gcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTAcc                                                                                                         >  1:454382‑M1/104‑150 (MQ=255)
                                               ggCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCt                                                                                                        <  2:885028/150‑1 (MQ=255)
                                                 ggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgt                                                                                                      <  1:1448898‑M1/50‑1 (MQ=255)
                                                  aGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgtg                                                                                                     <  2:2097588/150‑1 (MQ=255)
                                                  aGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCtgtg                                                                                                     <  2:1021108/150‑1 (MQ=255)
                                                   ttccgatctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAACCACGCCGCCTTCACGGCCTGTGGGCTACCTGTgg                                                                                                    >  1:1207781‑M1/99‑150 (MQ=255)
                                                   gTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCTGACGCAGCGTGGTGCGCAGCCTTTACCGGCCTCTGCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                                    <  1:1124023/150‑1 (MQ=255)
                                                     cgcgcgcgcgCAATGGCGGCCGGAAGCGATCGCGCAGCGGTCCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGa                                                                                                  <  1:391763/150‑1 (MQ=255)
                                                     cgcgcgcgcgCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGa                                                                                                  <  2:1155965/150‑1 (MQ=255)
                                                      gcgcgcgcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTggg                                                                                                              <  2:1563029/137‑1 (MQ=255)
                                                          gcgcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCggg                                                                                             >  2:40438/1‑150 (MQ=255)
                                                           tagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGcccgcgaaa                                                                                                                                              <  2:1121139‑M1/10‑5 (MQ=255)
                                                              gcAATGGCGGCCGGAAGCGATCGCGCAGATGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATg                                                                                         <  2:302502/150‑1 (MQ=255)
                                                               cAATGGCGGCCAGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGc                                                                                        >  1:107233/1‑150 (MQ=255)
                                                               cAATGGCGGACGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGTCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGc                                                                                        <  1:526061/150‑1 (MQ=255)
                                                                        ccGGCAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAg                                                                               <  2:2208302/150‑1 (MQ=255)
                                                                        ccGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCGGGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAg                                                                               >  1:1202965/1‑150 (MQ=255)
                                                                           gAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                            <  2:304367/150‑1 (MQ=255)
                                                                            aaGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCTCTGAACCTTTACGTGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGcc                                                                           <  1:626586/150‑1 (MQ=255)
                                                                             ttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAACCCCGCGGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                          >  2:1401023‑M1/73‑150 (MQ=255)
                                                                             aGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                          <  1:311626/150‑1 (MQ=255)
                                                                              gCGATCGCGTAGCGGACCACGGTGCCAACGGCTGATTTGCGCTGAACCTTTACCGGCCTCATCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCACGGCCTGTTGGCTCGCTGTGAGTGCGGGCATGCCCGCGACAGGGCCgg                                                                         >  2:2071339/1‑150 (MQ=255)
                                                                                gATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGca                                                                       >  2:1364853/1‑150 (MQ=255)
                                                                                 aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcac                                                                      >  1:2234525/1‑150 (MQ=255)
                                                                                 aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcac                                                                      >  1:1796386/1‑150 (MQ=255)
                                                                                    gcgcAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAgg                                                                   >  1:1383400/1‑150 (MQ=255)
                                                                                        tttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCcac                                                                                                                                            <  1:1481722‑M1/12‑1 (MQ=255)
                                                                                        tttgaatttactgggcttttgtttttagggggggtacctgtgccggccctttcgcgggcatGCCCGCTCCcac                                                                                                                                            >  2:1481722‑M1/62‑73 (MQ=255)
                                                                                        aGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcc                                                               >  2:1559707/1‑150 (MQ=255)
                                                                                             aCCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACCGGTAccccccc                                                          >  1:1713766/1‑150 (MQ=255)
                                                                                               cACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAggtag                                                                                                                                      >  1:264596/1‑69 (MQ=255)
                                                                                               cACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAggtag                                                                                                                                      <  2:264596/72‑4 (MQ=255)
                                                                                               cACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTa                                                        >  1:1963285/1‑150 (MQ=255)
                                                                                                   gTGCCAGAGGCTGATTTGCGCTGAACCTTTACCCGCCTCGTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTCCCTGGGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTaaaaa                                                    <  2:1074858/150‑1 (MQ=255)
                                                                                                      ccAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaa                                                 <  1:2438656/150‑1 (MQ=255)
                                                                                                      ccAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaa                                                 >  1:1062097/1‑150 (MQ=255)
                                                                                                       cAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaa                                                >  1:2326798/1‑150 (MQ=255)
                                                                                                        agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                               <  2:2326798/150‑1 (MQ=255)
                                                                                                        agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                               <  1:1559707/150‑1 (MQ=255)
                                                                                                        agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                               <  1:1199362/150‑1 (MQ=255)
                                                                                                        agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTAACTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                               <  2:185465/150‑1 (MQ=255)
                                                                                                         gagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAg                                              <  2:1062097/150‑1 (MQ=255)
                                                                                                         gagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAg                                              >  2:695091/1‑150 (MQ=255)
                                                                                                            gCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGccc                                           <  2:969221/150‑1 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTc                                                                                                                          >  1:1931860/1‑69 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTc                                                                                                                          <  2:1931860/69‑1 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAgg                                                                   >  2:244090/1‑124 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAgg                                                                   <  1:244090/124‑1 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAccccccc                                                          <  1:113638/133‑1 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAccccccc                                                          >  2:113638/1‑133 (MQ=255)
                                                                                                              tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAg                                         >  2:2139827/1‑150 (MQ=255)
                                                                                                                      gcTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCAGGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCa                                 >  1:1845629/1‑150 (MQ=255)
                                                                                                                         gAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAc                              <  1:1364853/150‑1 (MQ=255)
                                                                                                                          aaCCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAcc                             >  1:1219806/1‑150 (MQ=255)
                                                                                                                             cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTCATGGAGCGGGCGTTGCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCtt                          >  1:1482985/1‑150 (MQ=255)
                                                                                                                                   cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccccc                                                           >  1:1755986/1‑111 (MQ=255)
                                                                                                                                   cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccccc                                                           <  2:1755986/111‑1 (MQ=255)
                                                                                                                                   cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGaa                    >  2:818698/1‑150 (MQ=255)
                                                                                                                                    ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAAc                   >  1:1803130/1‑150 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcg                                                                                     <  2:878909/83‑1 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcg                                                                                     >  1:2115089/1‑83 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcg                                                                                     >  1:878909/1‑83 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACg                  >  1:472985/1‑150 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACg                  >  1:473380/1‑150 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACg                  >  2:1858332/1‑150 (MQ=255)
                                                                                                                                     gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAACCTGGGCGAAcc                  >  1:995694/1‑149 (MQ=255)
                                                                                                                                      ccTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGc                 >  1:1954708/1‑150 (MQ=255)
                                                                                                                                        tctTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtg               <  2:1803130/150‑1 (MQ=255)
                                                                                                                                        tctTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtg               >  1:1136843/1‑150 (MQ=255)
                                                                                                                                          ttCGCGGGCGCGCCCGCTCCCATCGGACTCCGGCCGCCTTCAATGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgtg             <  2:1202965/150‑1 (MQ=255)
                                                                                                                                             gcgGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGAt          <  1:1623458/150‑1 (MQ=255)
                                                                                                                                                     gcCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGTCCGGAAAACCCGAGGCATTCAGATAGAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGACTCCCGCTa  >  1:2112771/1‑150 (MQ=255)
                                                                                                                                                     GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCggg                                                                                             <  2:1792408‑M1/59‑1 (MQ=255)
                                                                                                                                                     GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTa  <  2:595705‑M1/150‑1 (MQ=255)
                                                                                                                                                     GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTa  >  2:1383400‑M1/1‑150 (MQ=255)
                                                                                                                                                     GCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCACAGTAAATTAAAAACCTTGGCGAACGCTGTGGATTCCCGCTa  <  1:412418‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTA  >  NC_002947/5333094‑5333392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.