New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5546950 | 85 (0.910) | 6 (0.070) | 6/240 | NT | 6.5% | coding (2152/2574 nt) | rnr | exoribonuclease R |
? | NC_002947 | = 5546982 | 91 (1.020) | coding (2120/2574 nt) | rnr | exoribonuclease R |
CTTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5546800‑5546950 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCGC < NC_002947/5546982‑5546834 CTTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGAC > 1:1406201/1‑150 TTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC > 1:576159/1‑150 TTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC > 1:1802000/1‑150 TCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCG < 1:381340/126‑1 TCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCG > 2:381340/1‑126 TTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGA‑CCGGTACACCATCGCCTGGCCGGCGAGC > 1:2052487/1‑107 TTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGA‑CCGGTACACCATCGCCTGGCCGGCGAGC < 2:2052487/107‑1 TCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGC < 2:1658409/97‑1 TCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGC > 1:1658409/1‑97 CGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGG < 1:1187655/150‑1 CGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCT < 1:595181/93‑1 CGACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCT > 2:595181/1‑93 ACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTTGCCGCACCGATCGGCC > 2:130734/1‑150 ACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACC < 1:1786940/131‑1 ACCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACC > 2:1786940/1‑131 CCCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGCCATGGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCG > 1:23930/1‑150 CCGGTACACCATCGCCTGGCCGGCGAGCGCGCCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCGC > 1:317949/1‑150 CTTTTTCAGCAACCGGTGCGGCGCCACGCTGCTTGCGGCCGATCGGTGCGGCGAGGGTCTTTTCCGACACTTCGAAGTCGATCTTGCGCTCATCCAGATCAACACGCATGACCTTGACTTCGATGGTGTCGCCCAAGCGGAAGCTGCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5546800‑5546950 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCGGTACACCATCGCCTGGCCGGCGAGCGCACCGGTCGCAGCTTCCGCTTGGGCGACACCATCGAAGTCAAGGTCATGCGTGTTGATCTGGATGAGCGCAAGATCGACTTCGAAGTGTCGGAAAAGACCCTCGCCGCACCGATCGGCCGC < NC_002947/5546982‑5546834 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |