New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5655139 | 79 (0.850) | 6 (0.070) | 6/236 | NT | 7.2% | coding (458/1059 nt) | epd | D‑erythrose 4‑phosphate dehydrogenase |
? | NC_002947 | = 5655159 | 79 (0.900) | coding (438/1059 nt) | epd | D‑erythrose 4‑phosphate dehydrogenase |
CAGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5654985‑5655139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggcCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTGA < NC_002947/5655159‑5655011 CAGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACAC < 1:1398688/150‑1 gGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGTCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACC < 2:1785976/149‑1 GGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCA < 1:517200/150‑1 GTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAG < 1:1070923/150‑1 GTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAG < 2:2070836/150‑1 GTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAG < 1:1951839/150‑1 TCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGG > 1:945132/1‑150 CTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC < 2:1148352/150‑1 CTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGCTGGTGGTGCACGAGGCGTTGGACACCAGGC < 1:2289852/150‑1 CGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTG < 1:99173/150‑1 CGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAA < 1:1057886/150‑1 GAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGG < 1:1311323/105‑1 GAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGG > 2:1311323/1‑105 GATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC < 1:1690687/101‑1 GATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC > 2:1690687/1‑101 ATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCA < 2:600174/80‑1 ATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCA > 1:600174/1‑80 ATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGC < 1:181279/101‑1 ATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGC > 2:181279/1‑101 GTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGT < 2:2158841/52‑1 GTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGT > 1:2158841/1‑52 ACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCACCGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATAT < 1:167215/110‑1 ACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGC > 1:1595957/1‑150 ACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATAT > 2:167215/1‑110 CCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCC > 2:2183918/1‑150 CCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTG < 1:481902/98‑1 CCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTG > 2:481902/1‑98 CAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCG > 2:1628386/1‑150 CAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCG > 1:1465093/1‑150 GCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATC > 1:1628530/1‑123 GCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATC < 2:1628530/123‑1 GCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCAACGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTG > 1:866342/1‑150 CCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTGA < 2:941600/150‑1 CAGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5654985‑5655139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggcCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTGA < NC_002947/5655159‑5655011 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |