New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5712250	92 (0.990)	5 (0.050)	5/244	NT	5.2%	coding (263/624 nt)	PP_5012	hypothetical protein
	?	NC_002947	= 5712282	93 (1.020)					coding (295/624 nt)	PP_5012	hypothetical protein

TCGACTGCCGCCAACCGGCCCTGCAGGTGTTCATCCTGCCCGATGAAGAGGGCCTGATGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5712100‑5712250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCAGTTGCGCCAGGCTACCGGCGGGGGCGCGCAGGCGGCAGTCGACCTCGCCCTGCCAATGGGCGGCGAGCATCAGGCCCTCTTCATCGGGCA  <  NC_002947/5712282‑5712136                                                                                                                                                                                                                                                                                                            TCGACTGCCGCCAACCGGCCCTGCAGGTGTTCATCCTGCCCGATGAAGAGGGCCTGATGCTCGACGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCG                                                                                                                                                      >  2:1326370/1‑150                                    CTGCCCGATGAAGAGGGCCTGATGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGC                                                                                                                   <  2:1814625/150‑1                                                          TGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC                                                                                                                                                     >  1:1610648/1‑94                                                          TGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC                                                                                                                                                     <  2:1610648/94‑1                                                             TCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGT                                                                                                                >  1:920686/1‑128                                                             TCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGT                                                                                                                <  2:920686/128‑1                                                                                        ACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCA                                                                                            <  1:1699235/121‑1                                                                                        ACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCA                                                                                            >  2:1699235/1‑121                                                                                            CCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACC                                                                                                                                                       >  1:1852062/1‑58                                                                                            CCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACC                                                                                                                                                       <  2:1852062/58‑1                                                                                                                                                     CGCCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCAGTTGCGCCAGGCTACCGGCGGGGGCGCGCAGGCGGCAGTCGACCTCGCCCTGCCAATGGGCGGCGAGCATCAGGCCCTCTTCATCGGGCA  <  2:210297/150‑1                                                                                                                                                                                                                                                                                                            TCGACTGCCGCCAACCGGCCCTGCAGGTGTTCATCCTGCCCGATGAAGAGGGCCTGATGCTCGCCGCCCATTGGCAGGGCGAGGTCGACTGCCGCCTGCGCGCCCCCGCCGGTAGCCTGGCGCAACTGGCCTTGGTCAAGGACAAGACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5712100‑5712250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGTGCAGCTCGACCTGCGGGCTGTGCAGCACAGCGGTCTTGTCCTTGACCAAGGCCAGTTGCGCCAGGCTACCGGCGGGGGCGCGCAGGCGGCAGTCGACCTCGCCCTGCCAATGGGCGGCGAGCATCAGGCCCTCTTCATCGGGCA  <  NC_002947/5712282‑5712136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.