New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 143265 =84 (0.900)8 (0.090) 5/240 NT 9.0% coding (213/291 nt) PP_5428 hypothetical protein
?NC_002947 143284 = 82 (0.920)coding (232/291 nt) PP_5428 hypothetical protein

Only 100 of 101 total aligned reads displayed.

CTCGGCATGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTATCACTTTCCTC  >  NC_002947/143116‑143413
                                                                                                                                                     |                                                                                                                                                     
cTCGGCATGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGAc                                                                                                                                                       <  1:1523368/150‑1 (MQ=255)
 tCGGCATGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACt                                                                                                                                                      >  2:1110211/1‑150 (MQ=255)
 tCGGCATGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACt                                                                                                                                                      >  1:2084888/1‑150 (MQ=255)
  cGGCATGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTg                                                                                                                                                     >  1:1633110/1‑150 (MQ=255)
      aTGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑Ag                                                                                                                                                >  2:211027/1‑150 (MQ=255)
                 gctgACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTggcca                                                                                                                                     >  1:1251997/1‑150 (MQ=255)
                  ctgACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGACTGGCTGAGCAGGTGGCGGCTGAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTggccag                                                                                                                                    >  2:1231025/1‑150 (MQ=255)
                   tgACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTggccagg                                                                                                                                   >  1:1898199/1‑150 (MQ=255)
                   tgACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTggccagg                                                                                                                                   <  1:1252530/150‑1 (MQ=255)
                    gACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTggccaggc                                                                                                                                  <  2:1782973/150‑1 (MQ=255)
                    aggaaagtgatagcccaactcagcatggtagttctcctttctttttgcggaatcgatccggccgcctggtcagaaaacccagcgctcctggggaacaactttttccacagtggccggtgagacaatggcCTGGC‑AGCCCGCTggccaggc                                                                                                                                  >  1:1491003‑M1/130‑150 (MQ=255)
                       cTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCAt                                                                                                                               >  1:1202365/1‑150 (MQ=255)
                       cTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCAt                                                                                                                               >  2:1291521/1‑150 (MQ=255)
                                 ggCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCg                                                                                                                     >  2:39605/1‑150 (MQ=255)
                                  gCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCgg                                                                                                                    >  2:117650/1‑150 (MQ=255)
                                   ccTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGc                                                                                                                   <  2:1985305/150‑1 (MQ=255)
                                     gatagcccaactcagcatggtagttctcctttctttttgcggaatcgatccggccgcctggtcagaaaacccagcgctcctggggaacaactttttccacagtggccgctgaCTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCa                                                                                                                 <  2:234383‑M1/38‑1 (MQ=255)
                                       ttctATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAGGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACt                                                                                                               >  2:167077/1‑150 (MQ=255)
                                       ttctATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACt                                                                                                               >  2:169190/1‑150 (MQ=255)
                                       ttctATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACt                                                                                                               >  2:401147/1‑150 (MQ=255)
                                       tagcccaactcagcatggtagttctcctttctttttgcggaatcgatccggccgcctggtcagaaaacccagcgctcctggggaacaactttttccacagtggccgctgaCTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACt                                                                                                               >  1:1386265‑M1/111‑150 (MQ=255)
                                        tctATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACtg                                                                                                              >  2:2374361/1‑150 (MQ=255)
                                         gcccaactcagcatggtagttctcctttctttttgcggaatcgatccggccgcctggtcagaaaacccagcgctcctggggaacaactttttccacagtggccgctgaCTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACtgt                                                                                                             >  1:234383‑M1/109‑150 (MQ=255)
                                         ctATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACtgt                                                                                                             <  2:699996/150‑1 (MQ=255)
                                              aCAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGaaa                                                                                                        >  2:119958/1‑150 (MQ=255)
                                               cAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGt                                                                                                                            <  2:1514778/129‑1 (MQ=255)
                                               cAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGt                                                                                                                            >  1:1514778/1‑129 (MQ=255)
                                                aGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGaaaaa                                                                                                      <  1:401147/150‑1 (MQ=255)
                                                       aGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAACTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTc                                                                                               >  1:1551662/1‑150 (MQ=255)
                                                         aCGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTccc                                                                                             <  2:1898199/150‑1 (MQ=255)
                                                         aCGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCACTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTccc                                                                                             <  2:1009561/150‑1 (MQ=255)
                                                          cGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTcccc                                                                                            <  2:1202365/150‑1 (MQ=255)
                                                           ggCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCa                                                                                           <  1:1630399/150‑1 (MQ=255)
                                                            gcgcGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAg                                                                                          >  2:731646/1‑150 (MQ=255)
                                                              gcgTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGa                                                                                        >  2:1968475/1‑150 (MQ=255)
                                                                   tGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCt                                                                                   <  1:334555/150‑1 (MQ=255)
                                                                     gCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTgg                                                                                 <  2:2123696/150‑1 (MQ=255)
                                                                     gCTGAGCAGGTGGCGGATAAGAATGCCCTGTTGACGCAAATGCAGGGAACTCGTGACAACACCTTGGTCAAGGCCGCTGACTGGC‑AGTCAGCTGGCCAGGCCATTGTCTCATCGAAAAAAAAAAAAAAAGTTGTTCCCCAGGAGCGCTgg                                                                                 <  2:188547/150‑1 (MQ=255)
                                                                        tttgcggaatcgatccggccgcctggtcagaaaacccagcgctcctggggaacaactttttccacagtggccgctgaCTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACtgt                                                                                                             <  2:1400132‑M1/42‑1 (MQ=255)
                                                                        tttgcggaatcgatccggccgcctggtcagaaaacccagcgctcctggggaacaactttttccacagtggccgctgaCTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACtgt                                                                                                             >  1:1400132‑M1/78‑119 (MQ=255)
                                                                              gTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGa                                                                        >  1:2346392/1‑150 (MQ=255)
                                                                               tGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGAc                                                                       <  1:2374361/150‑1 (MQ=255)
                                                                                  cggcTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAg                                                                    <  1:211027/150‑1 (MQ=255)
                                                                                  cggcTCAGACTGCCCCGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAg                                                                    <  1:105244/150‑1 (MQ=255)
                                                                                   ggcTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAgg                                                                   >  2:464037/1‑150 (MQ=255)
                                                                                    gcTCAGACTGCCCTGTTGACGCAAACTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAggc                                                                  <  2:1551662/150‑1 (MQ=255)
                                                                                      tCAGACTGCCCTGTTCACGCAAAATCAGGCAACTCGCGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGTCCACTGTGGAGAAAGTTGTTCCCCAGGAGCGCTGGGTTGTCTGACCAggcgg                                                                >  2:750060/1‑150 (MQ=255)
                                                                                            tGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGAt                                                          <  2:2385099/150‑1 (MQ=255)
                                                                                            tGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGAt                                                          <  1:1110211/150‑1 (MQ=255)
                                                                                                 tGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGAtt                                                     >  2:594249/1‑150 (MQ=255)
                                                                                                  gTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTc                                                    <  1:117650/150‑1 (MQ=255)
                                                                                                  gTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTc                                                    <  1:1231025/150‑1 (MQ=255)
                                                                                                     gACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGc                                                 <  2:2346392/150‑1 (MQ=255)
                                                                                                        gCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCt                                                                          <  2:1399281/122‑1 (MQ=255)
                                                                                                        gCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCt                                                                          >  1:1399281/1‑122 (MQ=255)
                                                                                                        gCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCaaa                                              >  2:2450023/1‑150 (MQ=255)
                                                                                                        gCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTATCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCaaa                                              >  1:1249226/1‑150 (MQ=255)
                                                                                                             ttCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAaaagaa                                         >  2:815580/1‑150 (MQ=255)
                                                                                                              tCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAaaagaaa                                        <  1:39605/150‑1 (MQ=255)
                                                                                                                aGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAgg                                      >  2:2295144/1‑150 (MQ=255)
                                                                                                                  gCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGgag                                    >  1:472229/1‑150 (MQ=255)
                                                                                                                  gCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTATAAAAGCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGgag                                    >  1:2376161/1‑150 (MQ=255)
                                                                                                                   cAACTCGTGCCAACACCTTGGTCAGGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGCACAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGgaga                                   <  1:167077/150‑1 (MQ=255)
                                                                                                                   cAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATc                                                         <  2:1808923/128‑1 (MQ=255)
                                                                                                                   cAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATc                                                         >  1:1808923/1‑128 (MQ=255)
                                                                                                                   cAACTCGTCCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGACCCACCCGCCGCTGGAAACTCAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGgaga                                   <  1:169190/150‑1 (MQ=255)
                                                                                                                    aaCTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAggcg                                                                 >  2:396989/1‑119 (MQ=255)
                                                                                                                    aaCTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAggcg                                                                 <  1:396989/119‑1 (MQ=255)
                                                                                                                    aaCTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAaaagaaag                                       <  1:1895954/145‑1 (MQ=255)
                                                                                                                    aaCTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAaaagaaag                                       >  2:1895954/1‑145 (MQ=255)
                                                                                                                         gTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTggg                                                                                >  1:827476/1‑99 (MQ=255)
                                                                                                                         gTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTggg                                                                                <  2:827476/99‑1 (MQ=255)
                                                                                                                         gTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTAcc                             >  2:760506/1‑150 (MQ=255)
                                                                                                                           gCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGAAGAACTACCAt                           >  1:864055/1‑150 (MQ=255)
                                                                                                                              aaCACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGAc                                                                       >  2:178390/1‑103 (MQ=255)
                                                                                                                              aaCACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGAc                                                                       <  1:178390/103‑1 (MQ=255)
                                                                                                                                cacCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGa                      >  1:1942045/1‑150 (MQ=255)
                                                                                                                                 acCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAg                     >  1:313948/1‑150 (MQ=255)
                                                                                                                                 acCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAg                     >  1:1499228/1‑150 (MQ=255)
                                                                                                                                  ccTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTACCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGAtt                                                     >  1:2451016/1‑117 (MQ=255)
                                                                                                                                  ccTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTACCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGAtt                                                     <  2:2451016/117‑1 (MQ=255)
                                                                                                                                   cTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGtt                   <  1:1291521/150‑1 (MQ=255)
                                                                                                                                       gTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGc               <  2:2236957/150‑1 (MQ=255)
                                                                                                                                        tCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGCGCGCTGGGTTTTCTGACCAGGCGGCCGGAt                                                          >  1:1342661/1‑106 (MQ=255)
                                                                                                                                        tCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCt                                                                          <  2:299038/90‑1 (MQ=255)
                                                                                                                                        tCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCt                                                                          >  1:299038/1‑90 (MQ=255)
                                                                                                                                        tCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGAt                                                          <  2:1342661/106‑1 (MQ=255)
                                                                                                                                          aaGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACTGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTAt            >  1:2061866/1‑150 (MQ=255)
                                                                                                                                          aaGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTAt            >  1:1523454/1‑150 (MQ=255)
                                                                                                                                          aaGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACAGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTAt            >  2:2075683/1‑150 (MQ=255)
                                                                                                                                             gCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTATCAc         >  2:371337/1‑150 (MQ=255)
                                                                                                                                               cGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGAt                                                      <  2:1799423/103‑1 (MQ=255)
                                                                                                                                               cGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGAt                                                      >  1:1799423/1‑103 (MQ=255)
                                                                                                                                               aatggcCTGGCCAGCGGGCTG‑CCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTTTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGcc                                                              <  2:64344‑M1/89‑1 (MQ=255)
                                                                                                                                               aatggcCTGGCCAGCGGGCTG‑CCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTTTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGcc                                                              >  1:64344‑M1/7‑95 (MQ=255)
                                                                                                                                                atggcCTGGCCAGCGGGCTG‑CCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTggg                >  1:1122076‑M1/6‑140 (MQ=255)
                                                                                                                                                atggcCTGGCCAGCGGGCTG‑CCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTggg                <  2:1122076‑M1/135‑1 (MQ=255)
                                                                                                                                                  tGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACTGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTATCACTTTcc    <  2:2061866/150‑1 (MQ=255)
                                                                                                                                                   gACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCACGAGCGCTGGGTTTTCTGACCAGGCGGCCGGAAAAAAAAAAAAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTATCACTTTCCt   <  2:2084888/150‑1 (MQ=255)
                                                                                                                                                    aCTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTATCACTTTCCtc  <  1:594249/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTCGGCATGGCGATGCTGCTGACCTTGGCCGCTGGCCTCTTCTATTACAGCTTGCAGACGGCGCGTCTGGCTGAGCAGGTGGCGGCTCAGACTGCCCTGTTGACGCAAATTCAGGCAACTCGTGCCAACACCTTGGTCAAGGCCGCTGACTGGC‑AGCCCGCTGGCCAGGCCATTGTCTCACCGGCCACTGTGGAAAAAGTTGTTCCCCAGGAGCGCTGGGTTTTCTGACCAGGCGGCCGGATCGATTCCGCAAAAAGAAAGGAGAACTACCATGCTGAGTTGGGCTATCACTTTCCTC  >  NC_002947/143116‑143413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.