New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1149925 =104 (1.110)6 (0.070) 5/234 NT 6.3% intergenic (‑166/+91) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 1150004 = 81 (0.930)intergenic (‑245/+12) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase

Only 100 of 116 total aligned reads displayed.

GAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAA  >  NC_002947/1149777‑1150066
                                                                                                                                                       |                                                                                                                                             
gaAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAAATAGCGTGGTCTAGTTC‑TAAAAGCTGGCGC‑GATCCCTgggg                                                                                                                                              >  2:1379976/1‑150 (MQ=255)
        aaTGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGc                                                                                                                                      <  2:591706/150‑1 (MQ=255)
        aaTGATAATGCTTATCAGCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGc                                                                                                                                      <  2:909393/150‑1 (MQ=255)
           gATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGAGGGCTTg                                                                                                                                   >  1:2403211/1‑150 (MQ=255)
            aTAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGGATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGc                                                                                                                                  >  2:1905891/1‑150 (MQ=255)
             tAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGcc                                                                                                                                 >  1:1175053/1‑150 (MQ=255)
              aaTGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGccc                                                                                                                                <  1:1395393/150‑1 (MQ=255)
              aaTGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGATAAAAATTGTAGTCCCAGGTCGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGccc                                                                                                                                <  2:565719/150‑1 (MQ=37)
               cttcgatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtggGGGAGCGGGCTTGc                                                                                                                                  <  2:2124321‑M1/14‑1 (MQ=255)
                gcattATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCcgc                                                                                                                              >  1:956968/4‑150 (MQ=255)
                  cTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGa                                                                                                                            >  2:437141/1‑150 (MQ=255)
                   ttATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGaa                                                                                                                           >  2:1619906/1‑150 (MQ=255)
                   ttATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCAAGCCcgctcc                                                                                                                           >  2:772230/1‑147 (MQ=255)
                       catcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACg                                                                                                                       <  1:1155619/150‑1 (MQ=255)
                        atcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACgg                                                                                                                      <  2:1982232/150‑1 (MQ=255)
                            gTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAAAACGGGCg                                                                                                                   >  2:132144/1‑150 (MQ=255)
                            gTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGa                                                                                                                  >  1:2427979/1‑150 (MQ=255)
                               cGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGGATACCCGCGAACACGGTCGAAGc                                                                                                               <  2:2434134/150‑1 (MQ=255)
                                 gCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCcgc                                                                                                                              <  1:958882/133‑1 (MQ=255)
                                 gCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCcgc                                                                                                                              >  2:958882/1‑133 (MQ=255)
                                 gCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCACGAACACGGGCGAAGccc                                                                                                             >  2:453285/1‑150 (MQ=255)
                                   aGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGCAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGt                                                                                                           <  1:1379976/150‑1 (MQ=255)
                                      tCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGGCCGTGcc                                                                                                        >  1:869954/1‑150 (MQ=255)
                                      tCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGcc                                                                                                        >  2:1055847/1‑150 (MQ=255)
                                      tCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGcc                                                                                                        >  1:1502395/1‑150 (MQ=255)
                                           tgtgGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATc                                                                                                     >  2:460998/1‑148 (MQ=255)
                                           tgtgGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATc                                                                                                     <  1:460998/148‑1 (MQ=255)
                                            gtgNAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAACGCT‑GCGCTTTTCTCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATccac                                                                                                  >  2:1520275/1‑150 (MQ=25)
                                              ggAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATccacca                                                                                                <  2:197015/150‑1 (MQ=255)
                                                aaTTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACg                                                                                              <  1:947542/150‑1 (MQ=255)
                                                    aTCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgtgt                                                                                          >  2:1745357/1‑150 (MQ=255)
                                                     tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                         <  1:743934/150‑1 (MQ=255)
                                                     tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                         <  1:640728/150‑1 (MQ=255)
                                                     tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                                         <  1:1323991/150‑1 (MQ=255)
                                                      cAGGAAACGGTATAGTTTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAACCGCCG‑GTTCTTCCAGACCGTATGAGCTGGCGC‑GATCCCCGGGGGAGCGGGTTTGCACATGACAAGTTGCGAAGCCCGTGCCATCCACCACGGTGTTg                                                                                        <  1:1751341/150‑1 (MQ=255)
                                                      cAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTg                                                                                        <  1:1149074/150‑1 (MQ=255)
                                                         gAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCt                                                                                     >  2:566747/1‑150 (MQ=255)
                                                              ggTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTngcg                                                                                <  2:1509797/150‑1 (MQ=255)
                                                               gTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                               <  2:956968/150‑1 (MQ=255)
                                                                tAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCggg                                                                              <  1:1976538/150‑1 (MQ=255)
                                                                gcctggtatgacaacgggtgggggttcagcaaccggatgctggacaacttgctggcgctcccccgggctggctgacgcgaaccgtggGGGAGCGGGCTTGCCAGCGAACCCGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTcgc                                                                                 >  2:1232163‑M1/88‑150 (MQ=255)
                                                                  ctggtatgacagcgagtgggggttcggctaccgtatgctgtacaactgcctggcgctgcaccgggctggctgacgcgacccgtggGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                               >  2:1203500‑M1/86‑150 (MQ=255)
                                                                  aaGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGTAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCa                                                                            >  2:1850382/1‑150 (MQ=255)
                                                                  aaGATTGTAGTCACTGGATGCCGTTTGC‑‑TTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGaa                                                                                                                 >  1:150492/1‑112 (MQ=255)
                                                                  aaGATTGTAGTCACTGGATGCCGTTTGC‑‑TTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGaa                                                                                                                 <  2:150492/112‑1 (MQ=255)
                                                                   aGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCaa                                                                           <  2:1175053/150‑1 (MQ=255)
                                                                     aTTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGa                                                                                                                                            >  1:2088281/1‑83 (MQ=255)
                                                                     aTTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGa                                                                                                                                            <  2:2088281/83‑1 (MQ=255)
                                                                         tAGTCACTGGATGCCGTTTGC‑GTTTTTTGGGAGCAACTGTGTTGCTCAATTTC‑TAAAAGCGGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGGGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGc                                                                     <  2:716828/150‑1 (MQ=255)
                                                                          acaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                               <  1:421465‑M1/65‑1 (MQ=255)
                                                                            tCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTcc                                                                  >  1:1299342/1‑150 (MQ=255)
                                                                            aacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacacgcggCGGCTCGGGCTTGCCCCCAAACAGTTTCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGc                                                                     >  1:2124321‑M1/76‑150 (MQ=255)
                                                                                tGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCtt                                                                                    <  2:1391848/128‑1 (MQ=255)
                                                                                 ggATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGTTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCacac                                                             <  2:496936/150‑1 (MQ=255)
                                                                                        gTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                      <  1:1297898/150‑1 (MQ=255)
                                                                                         tttGC‑TTTTTTTGGGTGCAACTGTCTTGCTCTTTTTC‑TAAAAGCTGGCGC‑TATCCCTTGGCGAGCGGGCTTGCCCGCAAACACGGGCTAAGCCCGTGCCATCCACCACGGTCTTGGCTTCGCGCGCCAAACCTCTCCCACACGGGTcgcg                                                     >  2:56023/1‑150 (MQ=18)
                                                                                           tGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTc                                                   <  1:1055847/150‑1 (MQ=255)
                                                                                            gcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgg                                                                                                                                              >  1:1100627‑M1/60‑61 (MQ=255)
                                                                                            gC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                                  >  1:2323987/1‑150 (MQ=255)
                                                                                               tttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTTCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGGCGCGTcagc                                                >  1:1474051/1‑150 (MQ=255)
                                                                                               tttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                               >  2:1121994/1‑119 (MQ=255)
                                                                                               tttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                               <  1:1121994/119‑1 (MQ=255)
                                                                                               tttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                           >  2:794453/1‑139 (MQ=255)
                                                                                               tttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCAGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGGCGCGTcagc                                                >  1:1473951/1‑150 (MQ=255)
                                                                                                ttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATcc                                                                                                    >  1:1549295/1‑97 (MQ=255)
                                                                                                ttttttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTGGCGGcagcc                                               >  2:1023415/1‑150 (MQ=255)
                                                                                                    ttGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCagccagcc                                           <  1:1962190/150‑1 (MQ=255)
                                                                                                       ggAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAgg                                                                         <  2:1892973/117‑1 (MQ=255)
                                                                                                       ggAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAgg                                                                         >  1:1892973/1‑117 (MQ=255)
                                                                                                            aaCTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                           >  1:224170/1‑126 (MQ=255)
                                                                                                            aaCTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                           <  2:224170/126‑1 (MQ=255)
                                                                                                                 tCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                       >  2:1275626/1‑141 (MQ=255)
                                                                                                                  cTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAg                             <  1:132144/150‑1 (MQ=255)
                                                                                                                  cTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAg                             <  1:1850382/150‑1 (MQ=255)
                                                                                                                   ttGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCTCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGTAATGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAgg                            <  1:1023415/150‑1 (MQ=255)
                                                                                                                    tGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGc                           >  2:555279/1‑150 (MQ=255)
                                                                                                                     gCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCa                          <  1:566747/150‑1 (MQ=255)
                                                                                                                       tCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACCCGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCCGGCCGt                        >  2:125158/1‑150 (MQ=255)
                                                                                                                       tCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCCGGCAGt                        >  2:2055230/1‑150 (MQ=255)
                                                                                                                       tCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGt                        >  1:1507042/1‑150 (MQ=255)
                                                                                                                       tCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGt                        >  2:534194/1‑150 (MQ=255)
                                                                                                                       tCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCATCACAACAACCACACTGTACGGTTCGATGTCGTTGCTGCCCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGt                        >  2:1462186/1‑150 (MQ=18)
                                                                                                                        cAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTcgc                                                                                 >  2:2300519/1‑92 (MQ=255)
                                                                                                                        cAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                       <  1:555279/150‑1 (MQ=255)
                                                                                                                         aaTTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg                                                                                                          <  1:1988332/66‑1 (MQ=37)
                                                                                                                         aaTTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg                                                                                                          >  2:1988332/1‑66 (MQ=37)
                                                                                                                         aaTTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTg                      >  1:1365057/1‑150 (MQ=255)
                                                                                                                          aTTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGt                     <  2:2427979/150‑1 (MQ=255)
                                                                                                                           tttC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTg                                                                                        >  2:499009/1‑82 (MQ=255)
                                                                                                                           tttC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTg                                                                                        <  1:499009/82‑1 (MQ=255)
                                                                                                                             tC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                  >  2:1869845/1‑150 (MQ=255)
                                                                                                                                tAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGc                >  2:45177/1‑150 (MQ=255)
                                                                                                                                 aaaaGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGCAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCa               <  1:2367530/150‑1 (MQ=255)
                                                                                                                                     gCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCa                          <  2:2299597/135‑1 (MQ=255)
                                                                                                                                     gCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCa                          >  1:2299597/1‑135 (MQ=255)
                                                                                                                                      cTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCgg          <  1:180540/150‑1 (MQ=255)
                                                                                                                                        ggCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGtt        <  2:2323987/150‑1 (MQ=255)
                                                                                                                                           gc‑gATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATcc                                                                                                    >  1:2314550/1‑55 (MQ=38)
                                                                                                                                           gc‑gATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATcc                                                                                                    <  2:2314550/55‑1 (MQ=38)
                                                                                                                                               aTCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGaa  >  1:1645543/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                             
GAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGC‑TTTTTTTGGGAGCAACTGTCTTGCTCAATTTC‑TAAAAGCTGGCGC‑GATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAA  >  NC_002947/1149777‑1150066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.