| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1156311 = | 57 (0.610) | 16 (0.200) | 10/218 | NT | 25.3% | intergenic (+8/‑208) | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase |
| ? | NC_002947 | 1156418 = | 45 (0.550) | intergenic (+115/‑101) | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase | |||||
GGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCC > NC_002947/1156162‑1156405 | ggccggggcattgagccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggccgtgccattttg > 2:1603276‑M1/150‑150 (MQ=255)ggccggggcattgagccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttg > 2:1603389‑M1/150‑150 (MQ=255)ggccggggcattgagccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttg > 1:691644‑M1/150‑150 (MQ=255)ggCCGTGCAGCAGTAGGGGTATGGGCTGGGGTTGGGGAGTGCGCGCAACATCGCCCTTAGCCATGGGGGCGAGGTGAGCTGGCTGAACCTGCTGGAGGGCGGGCTGCGAGTGACCATGTATCTGCCGCGGGGTATGGATTGAGTGTTTgg < 2:843624/150‑1 (MQ=255)ggCCGGGCAGCCGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgg < 2:1200787/150‑1 (MQ=255)ggCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGTGGATATACAGTCTTCGACTAACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgg < 1:46488/150‑1 (MQ=255)ggCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgg < 2:1806351/150‑1 (MQ=255)ggCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgg < 2:2446033/150‑1 (MQ=255)ggCCGGGCAGCAGCAGGGGTATGGGCGGGGGTTGGGCATTGGGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgg < 1:558860/150‑1 (MQ=255) gccggggcattgagccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttgg > 1:521242‑M1/149‑150 (MQ=255) gggCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑Tg > 1:138625/1‑150 (MQ=255) gcattgagccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCt < 1:55004‑M1/8‑1 (MQ=255) gcagcagGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCtgt > 1:505364/1‑150 (MQ=255) attgagccaactgttcacatacaggttgaggcggctcatgggacagcaagctcccggtcagtcgtttgcgaattctagccagcggggtcatcgcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCtgt > 2:1242780‑M1/141‑150 (MQ=255) gagccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCg > 2:2052903‑M1/138‑150 (MQ=255) cagGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCgg < 2:64839/150‑1 (MQ=255) ggggTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGGGGTGAGCTTGCGGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGc < 2:1225625/150‑1 (MQ=255) ccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGc > 2:55004‑M1/135‑150 (MQ=255) ccaactgttcacatacaggttgaggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGc > 1:635244‑M1/135‑150 (MQ=255) ggCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTcgc < 1:1515822/150‑1 (MQ=255) cTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCgg < 1:510147/150‑1 (MQ=255) cTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTCGGT‑TGCCTGTGCGGGCTTCTTCGCgg < 1:2156459/150‑1 (MQ=255) ggggTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGt < 2:89471/150‑1 (MQ=255) ttaggCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTCCGCTACTGCGGCCTGCGGGTGCCCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAAc < 1:2114692/147‑1 (MQ=255) ttGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCttcttc < 2:1982829/140‑1 (MQ=255) ttGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCttcttc > 1:1982829/1‑140 (MQ=255) tGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAAcc < 2:2082872/150‑1 (MQ=255) ggggggtcatgggccagcttgatccttgccagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtgcgaggcgtaccacattttGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTcc < 2:1881245‑M1/39‑1 (MQ=255) gcgcAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTAcg > 1:2057326/1‑149 (MQ=255) cgcAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa < 2:212968/150‑1 (MQ=255) ctcgcccccATGGCTATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGAc > 2:1532909/7‑150 (MQ=255) ctcgcccccATGGCTATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCCTCTTCGCgg > 2:1419074/7‑128 (MQ=255) ctcgcccccATGGCTATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCCTCTTCGCgg < 1:1419074/122‑1 (MQ=255) cATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa < 2:166597/145‑1 (MQ=255) cATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa > 1:166597/1‑145 (MQ=255) gCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGAGGACTTCGGCGCTGGGGAACCCGCTCCTacgacgcaaacct > 2:1378313/1‑143 (MQ=255) cagcttgatccttgccagtcgtttgagaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGt < 1:1480557‑M1/53‑1 (MQ=255) ccATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCa < 1:946399/150‑1 (MQ=255) cATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa > 2:1574576/1‑132 (MQ=255) cATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa < 1:1574576/132‑1 (MQ=255) ggggggGAGGTGGGCGTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGcgtc < 2:367222/150‑1 (MQ=255) ggggCGAGGTGAGCTTGCTGAACCTGCGGGGGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGcgtcg < 2:951344/150‑1 (MQ=255) ggCGAGGTGAGCTTGCTGAATCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCAATCTACGACCGAGTCAGGTTTGCGTCGTa < 1:64035/150‑1 (MQ=255) ggCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa < 1:2105838/150‑1 (MQ=255) cagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCCCCCACAACGACCGAGTCAGGTTTGCGTCGTa > 1:1881245‑M1/83‑150 (MQ=255) cagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa > 2:1926760‑M1/83‑150 (MQ=255) cagtcgtttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa > 1:1055279‑M1/83‑150 (MQ=255) gCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑t < 2:1539268/85‑1 (MQ=255) gCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑t > 1:1539268/1‑85 (MQ=255) gCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAg < 1:1532909/150‑1 (MQ=255) ggTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGc < 1:2448129/150‑1 (MQ=255) tttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGc > 1:1926532‑M1/77‑150 (MQ=255) ttgcgaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCgg > 2:335282‑M1/76‑150 (MQ=255) ttgagaattctagccagcggggtcatggcggatgtcacgaaggacgacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCgg > 2:1480557‑M1/76‑150 (MQ=255) tGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCgg < 2:138625/150‑1 (MQ=255) gAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGt < 1:2037393/102‑1 (MQ=255) gAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGt > 2:2037393/1‑102 (MQ=255) gCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTAACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGa < 1:1436724/123‑1 (MQ=255) gCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTAACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGa > 2:1436724/1‑123 (MQ=255) tGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTcc < 1:126217/105‑1 (MQ=255) tGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTcc > 2:126217/1‑105 (MQ=255) gAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAg < 2:208662/121‑1 (MQ=255) gAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAg > 1:208662/1‑121 (MQ=255) ccTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCt > 2:138288/1‑70 (MQ=255) ccTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCt < 1:138288/70‑1 (MQ=255) gAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCAcc < 1:1918393/137‑1 (MQ=255) gAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCAcc > 2:1918393/1‑137 (MQ=255) tGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCcgc < 1:1055277/130‑1 (MQ=255) tGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCcgc > 2:1055277/1‑130 (MQ=255) gggTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa > 2:2202142/1‑110 (MQ=255) gggTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa < 1:2202142/110‑1 (MQ=255) gggTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGccc < 1:297610/137‑1 (MQ=255) gggTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGccc > 2:297610/1‑137 (MQ=255) gTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCggg < 2:190507/116‑1 (MQ=255) gTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCggg > 1:190507/1‑116 (MQ=255) ccTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgggg < 1:2219240/38‑1 (MQ=255) ccTGTATCTGCCGCGGGGTATGGATTGAGTTTTTgggg > 2:2219240/1‑38 (MQ=255) cTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa > 1:2372956/1‑78 (MQ=255) cTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACaa < 2:2372956/78‑1 (MQ=255) gacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGa < 1:2452462‑M1/71‑1 (MQ=255) gacgggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGa > 2:2452462‑M1/31‑101 (MQ=255) gtgattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa < 2:595565‑M1/68‑1 (MQ=255) gggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa > 1:1728258‑M1/28‑95 (MQ=255) gggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa > 1:595565‑M1/28‑95 (MQ=255) gggattgtcaccgggcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTa < 2:1728258‑M1/68‑1 (MQ=255) gcgGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCggg > 1:2029503/1‑99 (MQ=255) gcgGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCggg < 2:2029503/99‑1 (MQ=255) gggTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAgg > 2:2147508/1‑77 (MQ=255) gggTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAgg < 1:2147508/77‑1 (MQ=255) gcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGt > 2:1305260‑M1/14‑90 (MQ=255) gcagtgacattttGGG‑TGCCTGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGt < 1:1305260‑M1/77‑1 (MQ=255) aTTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCcgc < 1:1084970/97‑1 (MQ=255) aTTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCcgc > 2:1084970/1‑97 (MQ=255) | GGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTGAACCTGCGGGAGGGCGGGCTGCGGGTGACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGG‑TGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCC > NC_002947/1156162‑1156405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |