New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1754893 =136 (1.460)7 (0.080) 6/248 NT 5.3% coding (260/342 nt) PP_1557 hypothetical protein
?NC_002947 1754919 = 114 (1.230)coding (286/342 nt) PP_1557 hypothetical protein

Only 100 of 153 total aligned reads displayed.

GGCCTGTTTCACGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTT  >  NC_002947/1754745‑1755037
                                                                                                                                                    |                                                                                                                                                  
ggCCTGTTTCACGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAAc                                                                                                                                                   >  2:2429122/1‑150 (MQ=255)
  ccTGTTTCACGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAAccc                                                                                                                                                 >  2:2189597/1‑150 (MQ=255)
      tttCACGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAg                                                                                                                                             <  1:1603116/150‑1 (MQ=255)
      tttCACGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGAACAATAAATGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAg                                                                                                                                             >  1:2252783/1‑150 (MQ=255)
          aCGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCAt                                                                                                                                         >  1:2088467/1‑150 (MQ=255)
           cGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATc                                                                                                                                        >  2:2258857/1‑150 (MQ=255)
                     tGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATTCGG‑‑GCCTGAg                                                                                                                            <  2:2088467/150‑1 (MQ=255)
                      acaacccaacgaccccagtgcgccagcaggtattcagccgacttctctacgttgctcatgtccttcccccgagtccccggtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtACCCTCAGGCATCCGG‑‑GCCTGAgg                                                                                                                           >  2:774357‑M1/127‑150 (MQ=255)
                       cGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGc                                                                                                                          <  2:2005165/150‑1 (MQ=255)
                           cACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACa                                                                                                                      >  2:987683/1‑150 (MQ=255)
                                cAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCa                                                                                                                 <  2:2251088/150‑1 (MQ=255)
                                  aTGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAgg                                                                                                               <  1:606205/150‑1 (MQ=255)
                                  aTGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAgg                                                                                                               <  1:2051198/150‑1 (MQ=255)
                                   tGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                              <  2:1201456/150‑1 (MQ=255)
                                   tGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                              <  2:883113/150‑1 (MQ=255)
                                     ccTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGGACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                            >  1:1417862/1‑150 (MQ=255)
                                     ccTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                            <  2:593971/150‑1 (MQ=255)
                                     ccTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAACTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGaa                                                                                                            <  2:106187/150‑1 (MQ=255)
                                       tCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                        >  1:1167223/1‑136 (MQ=255)
                                       tCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                        <  2:1167223/136‑1 (MQ=255)
                                          ggCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAAc                                                                                                       <  1:80973/150‑1 (MQ=255)
                                            cTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcg                                                                                                     >  1:764828/1‑150 (MQ=255)
                                                        tGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAAc                                                                                                                                                   >  1:2292566/1‑94 (MQ=255)
                                                        tGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                        >  1:989874/1‑119 (MQ=255)
                                                         gCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCGCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCCGCGCcggt                                                                                        <  1:784445/150‑2 (MQ=255)
                                                            aCCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAg                                                                                                                                             <  1:1121257/96‑1 (MQ=255)
                                                            aCCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAg                                                                                                                                             >  2:1121257/1‑96 (MQ=255)
                                                             ccGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCt                                                                                                                               <  1:1386729/107‑1 (MQ=255)
                                                              cGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                   >  2:213444/1‑150 (MQ=255)
                                                              cGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                   >  2:2371343/1‑150 (MQ=255)
                                                               ggCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGCAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                              <  1:1345368/122‑1 (MQ=255)
                                                               ggCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAggg                                                                                                              >  2:1345368/1‑122 (MQ=255)
                                                                  gAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                               <  2:1985541/150‑1 (MQ=255)
                                                                  gAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                               <  1:2371343/150‑1 (MQ=255)
                                                                       cctggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAgg                                                                                                                                            >  2:584203/1‑86 (MQ=255)
                                                                       cctggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAgg                                                                                                                                            <  1:584203/86‑1 (MQ=255)
                                                                          ggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                       >  2:2196628/1‑150 (MQ=255)
                                                                          ggccctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                       <  1:2054098/150‑1 (MQ=255)
                                                                             cctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAg                                                                                                           <  1:903543/111‑1 (MQ=255)
                                                                             cctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAg                                                                                                           >  2:903543/1‑111 (MQ=255)
                                                                             cctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGa                                                                    >  2:1895444/1‑150 (MQ=255)
                                                                              ctggATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                       <  1:594731/146‑1 (MQ=255)
                                                                              ctggAGGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCgg                                                                       >  2:594731/1‑146 (MQ=255)
                                                                                 gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcg                                                                                                     >  1:1989231/1‑113 (MQ=255)
                                                                                 gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                               <  1:1068232/135‑1 (MQ=255)
                                                                                 gATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCaccaac                                                                               >  2:1068232/1‑135 (MQ=255)
                                                                                  aTGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                               <  1:830832/150‑1 (MQ=255)
                                                                                   tGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                               <  1:1286329/149‑1 (MQ=255)
                                                                                   tGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                               >  2:1286329/1‑149 (MQ=255)
                                                                                      aCTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGa                                                           <  1:1895444/150‑1 (MQ=255)
                                                                                       cTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑Gc                                                                                                                                 <  1:1195694/79‑1 (MQ=255)
                                                                                       cTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGaa                                                          <  1:213444/150‑1 (MQ=255)
                                                                                        tGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAg                                                         >  2:226985/1‑150 (MQ=255)
                                                                                          gTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCCAGCAGTTGCAGAACCCTCACGCCTCCGG‑‑CCCTGAGGCTACATATCAGGGAACCAACCGGCCCGGCCCCGCCGGCACCACCCACACCGGCGCCTAGGGGGCAggc                                                       >  2:2160525/1‑149 (MQ=255)
                                                                                             aCCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GAATGCGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACAt                                                    <  2:81421/150‑1 (MQ=255)
                                                                                              cccAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAg                                                                                                                                             >  2:2084306/1‑62 (MQ=255)
                                                                                               ccAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGa                                                  >  2:166977/1‑150 (MQ=255)
                                                                                                 cccggtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtACCCTCAGGCATCCGG‑‑GCCTGAGGCt                                                                                                                         <  1:1862315‑M1/26‑1 (MQ=255)
                                                                                                 cccggtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtACCCTCAGGCATCCGG‑‑GCCTGAGGCt                                                                                                                         >  2:1862315‑M1/52‑77 (MQ=255)
                                                                                                 aGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGc                                                >  2:2325570/1‑150 (MQ=255)
                                                                                                  gCTCAGCCTGAAGCTGCAGGCCGTGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCa                                               >  2:1185197/1‑150 (MQ=255)
                                                                                                  gCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAAGCCCTCCGGGGACTAGGGGGAAGGACATGAGCa                                               >  1:1819474/1‑150 (MQ=255)
                                                                                                    tCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAAc                                             <  2:1438864/150‑1 (MQ=255)
                                                                                                    tCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAAc                                             >  1:703461/1‑150 (MQ=255)
                                                                                                     gtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtAGCCTCAGGCATCCGG‑‑GCCTGAgg                                                                                                                           >  2:5749‑M1/48‑71 (MQ=255)
                                                                                                     gtgtggttggtgccgccggcgccgcgccggttgcttccctgatatgtAGCCTCAGGCATCCGG‑‑GCCTGAgg                                                                                                                           <  1:5749‑M1/24‑1 (MQ=255)
                                                                                                       gCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTa                                          <  1:2196628/150‑1 (MQ=255)
                                                                                                        ccTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                   <  1:199422/108‑1 (MQ=255)
                                                                                                        ccTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCac                                                                                   >  2:199422/1‑108 (MQ=255)
                                                                                                        ccTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTag                                         >  1:2201305/1‑150 (MQ=255)
                                                                                                           gAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGa                                                  >  2:134110/1‑138 (MQ=255)
                                                                                                            aaGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                     <  2:764828/150‑1 (MQ=255)
                                                                                                            aaGCCGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGACCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                     <  1:2422934/150‑1 (MQ=255)
                                                                                                             aGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                        <  1:373644/66‑1 (MQ=255)
                                                                                                             aGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTa                                                                                                                        >  2:373644/1‑66 (MQ=255)
                                                                                                              gCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcgg                                                                                                    <  1:734434/85‑1 (MQ=255)
                                                                                                              gCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACcgg                                                                                                    >  2:734434/1‑85 (MQ=255)
                                                                                                              gCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGa                                                                    >  2:1633704/1‑117 (MQ=255)
                                                                                                               cTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCggg                                                                      <  2:1566258/114‑1 (MQ=255)
                                                                                                               cTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCggg                                                                      >  1:1566258/1‑114 (MQ=255)
                                                                                                                  tctgCCGCGTCGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGaa                                     <  2:808709/141‑1 (MQ=255)
                                                                                                                  cAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGc                               <  2:703461/150‑1 (MQ=255)
                                                                                                                   aGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGCGGAAGGACATGAGCAACGTAGAGAAGTCGGCt                              <  1:1918777/150‑1 (MQ=255)
                                                                                                                     gCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGa                            >  1:814920/1‑150 (MQ=255)
                                                                                                                      ccGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAg                                                                                                                <  1:1430012/65‑1 (MQ=255)
                                                                                                                      ccGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAg                                                                                                                >  2:1430012/1‑65 (MQ=255)
                                                                                                                        gcgACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATa                         >  2:1535011/1‑150 (MQ=255)
                                                                                                                             gcgGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACctgc                    >  1:1702851/1‑150 (MQ=255)
                                                                                                                               ggCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACTGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGGCGGCGGAATACctgctg                  >  2:1134038/1‑150 (MQ=255)
                                                                                                                                gCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACTGGCGCGGCGCCGGCGGCACCAACCACACCGGGGAGTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTgg                 <  1:1134038/150‑1 (MQ=255)
                                                                                                                                   gATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGc              >  1:1461363/1‑150 (MQ=255)
                                                                                                                                       ttccctgatatgtAGCCTCAGGC‑‑CCGGATGCCTGAGGGTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                               >  2:360104‑M1/14‑97 (MQ=255)
                                                                                                                                       ttccctgatatgtAGCCTCAGGC‑‑CCGGATGCCTGAGGGTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAgg                                                               <  1:360104‑M1/84‑1 (MQ=255)
                                                                                                                                       gAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTg          >  1:1609384/1‑150 (MQ=255)
                                                                                                                                        aGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTgg         <  1:226985/150‑1 (MQ=255)
                                                                                                                                           aGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAACACCTGCTGGAGCACTggggg      >  1:2651/1‑149 (MQ=255)
                                                                                                                                             ttGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCg    >  1:1157090/1‑150 (MQ=255)
                                                                                                                                               gaagaaCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTggg        >  1:2213714/1‑144 (MQ=255)
                                                                                                                                               gaagaaCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTggg        <  2:2213714/144‑1 (MQ=255)
                                                                                                                                               gaagaaCCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGtt  <  1:1037964/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GGCCTGTTTCACGAACTGCCATGCGACCACTGCAATGCCTCGGGCTGGGTAGTGGCTGCAACCGGCGAGGCCCTGGCCCTGGATGAACTGGTGACCCAGCTCAGCCTGAAGCTGCAGGCCGCGACGCGGCAGATCGAGCAGTTGAAGAACCCTCAGGCATCCGG‑‑GCCTGAGGCTACATATCAGGGAAGCAACCGGCGCGGCGCCGGCGGCACCAACCACACCGGGGACTAGGGGGAAGGACATGAGCAACGTAGAGAAGTCGGCTGAATACCTGCTGGAGCACTGGGGTCGTT  >  NC_002947/1754745‑1755037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.