BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2052897	93 (1.000)	6 (0.070)	6/232	NT	6.7%	coding (747/783 nt)	PP_1828	hypothetical protein
*	?	NC_002947	= 2052913	82 (0.950)	6 (0.070)	6/232	NT	6.7%	coding (731/783 nt)	PP_1828	hypothetical protein

Only 100 of 120 total aligned reads displayed.

GGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCTGGCGGCA  >  NC_002947/2052748‑2053044

ggTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGG                                                                                                                                                     <  2:1493176‑M1/150‑1 (MQ=255)

      cATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACg                                                                                                                                               <  1:1761744/150‑1 (MQ=255)

       aTGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACgg                                                                                                                                              >  2:2290969/1‑150 (MQ=255)

        tGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGc                                                                                                                                             >  2:1738662/1‑150 (MQ=255)

        tGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGc                                                                                                                                             >  2:1484174/1‑150 (MQ=255)

        tGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCGCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGc                                                                                                                                             <  1:2207463/150‑1 (MQ=255)

           tCACCGCCGGGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCaaa                                                                                                                                          <  1:1032759/150‑1 (MQ=255)

            cACCGCCTAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAAc                                                                                                                                         <  1:953909/150‑1 (MQ=255)

            cACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAAc                                                                                                                                         >  1:947062/1‑150 (MQ=255)

              ccgccgAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGc                                                                                                                                       <  2:1551874/150‑1 (MQ=255)

                      cAGTGAGGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCAccaggc                                                                                                                               <  2:1271438‑M2/150‑7 (MQ=255)

                       actgcCGCCAGCATCAGGAATTGTTCAAGGCCATCATTTACGAAATGTTGGGCCGCGAAGCGGCCCTACTTTCTATCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGtggcgtttgccgtgttccaggca                                                                                                                              <  1:533040‑M1/148‑24 (MQ=255)

                           ccgccAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGACGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCAAccaggcaggga                                                                                                                          <  2:359915‑M2/150‑12 (MQ=255)

                            cgccAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTaa                                                                                                                         >  1:1822182/1‑150 (MQ=255)

                             gccAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGTGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAAt                                                                                                                        <  1:511182/150‑1 (MQ=255)

                              ccAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATg                                                                                                                       <  2:843552/150‑1 (MQ=255)

                                    tCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTACTTTCCCCCGGCTGATCCGGTCTTGGCGGGTAGCAATCCCGGTCACCAGCCCTACCTTGAGCACGGCAAACCTCTCCAGCCTGATAATGGTGaaa                                                                                                                 >  1:711351/1‑150 (MQ=255)

                                    tCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGaaa                                                                                                                 <  2:1062292/150‑1 (MQ=255)

                                    tCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGaaa                                                                                                                 >  1:2169511/1‑150 (MQ=255)

                                      aGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGtggcgtttgccgtgttccaggcagggctgttgatctgg                                                                                                               <  2:1010008‑M1/150‑39 (MQ=255)

                                      aGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACg                                                                                                               >  1:1098128/1‑150 (MQ=255)

                                      aGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACg                                                                                                               >  1:2374286/1‑150 (MQ=255)

                                       ggAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCaaa                                                                                                                                          >  1:2186426/1‑122 (MQ=255)

                                       ggAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCaaa                                                                                                                                          <  2:2186426/122‑1 (MQ=255)

                                        gAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCa                                                                                                             >  2:2195992/1‑150 (MQ=255)

                                                 aaGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGt                                                                                                    <  2:1481/150‑1 (MQ=255)

                                                  aGGCCCTCGTTTAGGCTATTTGGGGACGCAACGAGACCCTAATTTCCCCCGTCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTc                                                                                                   >  2:627431/1‑150 (MQ=255)

                                                    gCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCtt                                                                                                 >  1:1302735/1‑150 (MQ=255)

                                                     cccTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTCGCGAATCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTc                                                                                                <  1:1484174/150‑1 (MQ=255)

                                                     cccTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTc                                                                                                >  1:902115/1‑150 (MQ=255)

                                                      ccTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGtggcgtttgccgtgttccaggcag                                                                                                                             <  2:1025147‑M1/120‑25 (MQ=255)

                                                      ccTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGtggcgtttgccgtgttccaggcag                                                                                                                             >  1:1025147‑M1/1‑96 (MQ=255)

                                                      ccTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTcg                                                                                               >  1:317288/1‑150 (MQ=255)

                                                      ccTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGACTGGAACAAGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTcg                                                                                               >  2:1025617/1‑150 (MQ=255)

                                                       cTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTcgc                                                                                              >  2:1577489/1‑150 (MQ=255)

                                                          gTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCt                                                                                           <  1:1577489/150‑1 (MQ=255)

                                                          gTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCt                                                                                           <  2:2453167/150‑1 (MQ=255)

                                                           tttAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTg                                                                                          >  1:2155880/1‑150 (MQ=255)

                                                                gCTATTTGGGGTCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATg                                                                                                                       <  1:2244672/116‑1 (MQ=255)

                                                                gCTATTTGGGGTCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATg                                                                                                                       >  2:2244672/1‑116 (MQ=255)

                                                                gCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCCGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTAtt                                                                                     >  1:1579428/1‑150 (MQ=255)

                                                                 cTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTAttt                                                                                    <  2:729058/150‑1 (MQ=255)

                                                                   aTTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTgg                                                                                  <  2:2181938/150‑1 (MQ=255)

                                                                          gCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTAcgcg                                                                           >  2:85346/1‑150 (MQ=255)

                                                                             gcgAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTTGTATTTGGCTACGCGCTc                                                                        <  1:75591/150‑1 (MQ=255)

                                                                                    ggCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGc                                                                 <  1:2195992/150‑1 (MQ=255)

                                                                                       ccTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTcg                                                              >  1:293820/1‑150 (MQ=255)

                                                                                        cTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGACAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTcgc                                                             >  2:1305217/1‑150 (MQ=255)

                                                                                          aaTTTCCCCTGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCAccaggcagg                                                                                                                            <  2:1661961‑M2/85‑10 (MQ=255)

                                                                                          aaTTTCCCCTGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCAccaggcagg                                                                                                                            >  1:1661961‑M2/1‑76 (MQ=255)

                                                                                             ttCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGt                                                        <  2:902115/150‑1 (MQ=255)

                                                                                              tCCCCCGGCTTATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGtt                                                       <  2:379512/150‑1 (MQ=255)

                                                                                               cccccGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTg                                                      <  2:317288/150‑1 (MQ=255)

                                                                                                ccccGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTg                                                                                          <  2:356125/113‑1 (MQ=255)

                                                                                                ccccGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTg                                                                                          >  1:356125/1‑113 (MQ=255)

                                                                                                  ccGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGccc                                                   >  2:1405514/1‑150 (MQ=255)

                                                                                                      cTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCccttcc                                               <  2:293820/150‑1 (MQ=255)

                                                                                                           gCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTc                                          >  2:395074/1‑150 (MQ=255)

                                                                                                           gCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTc                                          >  1:311878/1‑150 (MQ=255)

                                                                                                             ggTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGtggcgtttgccgtgttccagg                                                                                                                                <  1:2109162‑M1/62‑22 (MQ=255)

                                                                                                             ggTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGtggcgtttgccgtgttccagg                                                                                                                                >  2:2109162‑M1/1‑41 (MQ=255)

                                                                                                             ggTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCt                                        <  2:2169511/150‑1 (MQ=255)

                                                                                                                   aGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGaa                                                                                                                  <  2:569029/70‑1 (MQ=255)

                                                                                                                   aGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGaa                                                                                                                  >  1:569029/1‑70 (MQ=255)

                                                                                                                       ggTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTg                              <  1:941428/150‑1 (MQ=255)

                                                                                                                             aaTCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCccttcc                                               >  2:1090493/1‑127 (MQ=255)

                                                                                                                             aaTCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCccttcc                                               <  1:1090493/127‑1 (MQ=255)

                                                                                                                             aaTCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGc                        <  2:311878/150‑1 (MQ=255)

                                                                                                                              aTCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGcc                       >  1:521664/1‑150 (MQ=255)

                                                                                                                              aTCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGcc                       <  2:1579428/150‑1 (MQ=255)

                                                                                                                               tCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTGCGCGCTGGTATTTGGCTAcgc                                                                            <  2:899184/96‑1 (MQ=255)

                                                                                                                                ccAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATg                                                                                                                       >  2:2060874/1‑52 (MQ=255)

                                                                                                                                 cAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCctgc                    >  2:496106/1‑150 (MQ=255)

                                                                                                                                  aGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCctgct                   >  1:672271/1‑150 (MQ=255)

                                                                                                                                     tCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGtt                                                       <  1:77333/111‑1 (MQ=255)

                                                                                                                                       aaCAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCt                                                                                                  <  1:56329/66‑1 (MQ=255)

                                                                                                                                       aaCAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCt                                                                                                  >  2:56329/1‑66 (MQ=255)

                                                                                                                                        aCAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTgcagca             >  2:1382695/1‑150 (MQ=255)

                                                                                                                                         cAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGcagcag            <  2:1822182/150‑1 (MQ=255)

                                                                                                                                          aGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAgg           <  1:85346/150‑1 (MQ=255)

                                                                                                                                          aGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAgg           <  1:395074/150‑1 (MQ=255)

                                                                                                                                           tccctGCCTGGttgcgtttgccgtgttccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccgggggaaattagggccgcgtcgcggccccaaatagcctaaacgagggccttgaacaattcctgatgctggcgg          <  2:359915‑M1/149‑140 (MQ=255)

                                                                                                                                            cccTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGt                                                                                                                     <  2:1201747/42‑1 (MQ=255)

                                                                                                                                            cccTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCt         >  1:1926022/1‑150 (MQ=255)

                                                                                                                                             cctgcctgGtggcgtttgccgtgttccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccaggggaaatt                                                                         >  1:1661961‑M1/1‑9 (MQ=255)

                                                                                                                                             cctgcctgGtggcgtttgccgtgttccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccaggggaaatt                                                                         <  2:1661961‑M1/85‑77 (MQ=255)

                                                                                                                                             cctgcctgGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCTg        <  1:2330512/150‑1 (MQ=255)

                                                                                                                                              ctgcctgGAACACGGCAAACGCCAccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccgggggaaattagggccgcttcgcggccccaaatagcctaaacgagg                                     <  2:1025147‑M2/120‑97 (MQ=255)

                                                                                                                                              ctgcctgGAACACGGCAAACGCCAccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccgggggaaattagggccgcttcgcggccccaaatagcctaaacgagg                                     >  1:1025147‑M2/1‑24 (MQ=255)

                                                                                                                                               tgcctgGAACACGGCAAACGCCAccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccgatagaaagtagggccgcttcgcggcccaacatttcgtaaatgatggccttgaacaattcctgatgctggcggcagt      <  1:533040‑M2/150‑128 (MQ=255)

                                                                                                                                               tgcctgGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCctgc                    <  2:1235376/136‑1 (MQ=255)

                                                                                                                                               tgcctgGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCctgc                    >  1:1235376/1‑136 (MQ=255)

                                                                                                                                               tgcctgGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCTggc      <  1:404640/150‑1 (MQ=255)

                                                                                                                                                gcctgGtggcgtttgccgtgttccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccgggggaaattagggccgcttcgcggccccaaatagcctaaacgagggccttgaacaattcctgatgctggcctcactg     <  2:1271438‑M1/150‑145 (MQ=255)

                                                                                                                                                ccctgGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCTggcg     <  1:359915/149‑1 (MQ=255)

                                                                                                                                                 cctgGtggcgtttgccgtgttccaggcagggctgttgatctggattgctacccgctaagaccgcatcagccgggggaaattagggccgcttcgcggccccaaatagcctaaacgagggccttgaacaattcctgatgctggcggcactgc    >  1:2168882‑M1/1‑5 (MQ=255)

                                                                                                                                                 cctgGAACACGGCAAACGCCAccaggcagggctgttgatctggattgctacccgctaagacc                                                                                            <  1:2109162‑M2/62‑42 (MQ=255)

                                                                                                                                                 cctgGAACACGGCAAACGCCAccaggcagggctgttgatctggattgctacccgctaagacc                                                                                            >  2:2109162‑M2/1‑21 (MQ=255)

                                                                                                                                                   tgGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATGTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCTGGCGGCa  >  2:79200/1‑150 (MQ=255)

                                                                                                                                                    ggAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTAcgc                                                                            >  1:2113383/1‑75 (MQ=255)

GGTGTTCATGCTCACCGCCGAGCAGTGCCGCCAGCATCAGGAATTGTTCAAGGCCCTCGTTTAGGCTATTTGGGGCCGCGAAGCGGCCCTAATTTCCCCCGGCTGATGCGGTCTTAGCGGGTAGCAATCCAGATCAACAGCCCTGCCTGGAACACGGCAAACGCCACCAGGCAGGTAATGGTGAAACGCAATCCGCCGTCTTCGCGCTGGTATTTGGCTACGCGCTCATCCCGCTCGCGCAGTTGCCCTTCCTTTTCCTGCAGTTGCTGGTCGGCCTGCTGCAGCAGGCTGGCGGCA  >  NC_002947/2052748‑2053044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.