BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4301353	71 (0.760)	7 (0.080)	6/238	NT	8.8%	coding (474/675 nt)	PP_3774	hypothetical protein
*	?	NC_002947	= 4301361	77 (0.870)	7 (0.080)	6/238	NT	8.8%	coding (482/675 nt)	PP_3774	hypothetical protein

Only 100 of 104 total aligned reads displayed.

GGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCAACCCCCGC  >  NC_002947/4301210‑4301502

ggCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGaa                                                                                                                                                 >  2:1340559/1‑150 (MQ=255)

   ccgccgGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGc                                                                                                                                              >  2:743368‑M2/1‑149 (MQ=255)

     gccgGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGGTTGTTGTGCCACTGGGATCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGcgt                                                                                                                                            >  2:82262‑M2/1‑147 (MQ=255)

     gccgGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGcgt                                                                                                                                            >  1:180618‑M2/1‑147 (MQ=255)

      ccgGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGcgtg                                                                                                                                           >  1:567517‑M2/1‑146 (MQ=255)

       cgGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGccttcagacgtgg                                                                                                                                          <  1:378425‑M1/150‑14 (MQ=255)

         gTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCTCAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTa                                                                                                                                        >  2:1561631/1‑150 (MQ=255)

           aaaGGTGTTCTGGAACAAGGGAAAAATCAACCTGGGGTTTCGGCGCACCTTAAACCAAAACGACCCGGTGAATTCCGCAGTCCTGAAGGGGGTGCAACTGGGGGCGACGATCAAAATCAGCATGCATACACCGTCTGAATGCGTGGTaaa                                                                                                                                      >  2:680293/1‑149 (MQ=255)

              ggTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGt                                                                                                                                   >  2:894310/1‑150 (MQ=255)

                    cTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGc                                                                                                                             >  1:2381666/1‑150 (MQ=255)

                         aCAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAAt                                                                                                                        >  2:1826749/1‑150 (MQ=255)

                          cAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCCACCCGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATg                                                                                                                       <  2:2098415/150‑1 (MQ=255)

                             gggCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCaa                                                                                                                    >  2:1808626/1‑150 (MQ=255)

                              ggCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGCCTTCAGAcgtggtgtgaat                                                                                                                                   <  2:1147583‑M2/134‑13 (MQ=255)

                              ggCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGCCTTCAGAcgtggtgtgaat                                                                                                                                   >  1:1147583‑M2/1‑122 (MQ=255)

                               gCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACg                                                                                                                  >  1:864069/1‑150 (MQ=255)

                                 aaCATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCTAATGCAACggg                                                                                                                <  1:894310/150‑1 (MQ=255)

                                   cATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGATGGCGTGGTAACCGTGa                                                                                                                                 >  2:1092791/1‑131 (MQ=255)

                                   cATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGATGGCGTGGTAACCGTGa                                                                                                                                 <  1:1092791/131‑1 (MQ=255)

                                         ccTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGcgtg                                                                                                                                           <  2:1490561‑M2/115‑5 (MQ=255)

                                         ccTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGcgtg                                                                                                                                           >  1:1490561‑M2/1‑111 (MQ=255)

                                         ccTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGc                                                                                                        <  1:2395025/150‑1 (MQ=255)

                                            ggggTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTtc                                                                                                     <  2:1415509/150‑1 (MQ=255)

                                                ttgcGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTtcgtcg                                                                                                 <  1:2053630/147‑1 (MQ=255)

                                                   cGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGc                                                                                              <  1:1826749/150‑1 (MQ=255)

                                                   cGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGc                                                                                              <  2:864069/150‑1 (MQ=255)

                                                    ggCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCg                                                                                             <  2:705951/150‑1 (MQ=255)

                                                    ggCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCg                                                                                             >  1:1038510/1‑150 (MQ=255)

                                                       gcACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGAtt                                                                                          >  1:1664454/1‑150 (MQ=255)

                                                            ttCAACCAGACCGACCCGGTGAATACCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACgg                                                                                                                 <  2:131932/122‑1 (MQ=255)

                                                            ttCAACCAGACCGACCCGGTGAATACCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACgg                                                                                                                 >  1:131932/1‑122 (MQ=255)

                                                                 ccAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTc                                                                                                                                                     >  1:967875/1‑81 (MQ=255)

                                                                   aGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACa                                                                              <  2:156336/150‑1 (MQ=255)

                                                                   aGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACa                                                                              <  2:1664454/150‑1 (MQ=255)

                                                                   aGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACa                                                                              <  2:1473455/150‑1 (MQ=255)

                                                                    gaccgaccCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAg                                                                             >  2:895180/1‑150 (MQ=255)

                                                                         accCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCt                                                                        <  1:1340559/150‑1 (MQ=255)

                                                                          cccGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGCCGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCTAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTg                                                                       <  2:1102831/150‑1 (MQ=255)

                                                                             ggTGAATTCCACAGTCCTGGACGGGGGGCCACTGGTTGCGACGTTCAACATCAGCATTCACCCCCCCCATAAACGCTGGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGc                                                                    <  1:413758/150‑1 (MQ=255)

                                                                             ggTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGc                                                                    >  1:136950/1‑150 (MQ=255)

                                                                                   ttCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGaa                                                                                                                                                 <  2:1110780/67‑1 (MQ=255)

                                                                                   ttCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGaa                                                                                                                                                 >  1:1110780/1‑67 (MQ=255)

                                                                                   ttCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCTCTTCGTCGGGCGATTTGCAGCTCGACAGTAACTGGGCTTCACg                                                              >  1:854916/1‑150 (MQ=255)

                                                                                   ttCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACa                                                                              >  2:2067597/1‑134 (MQ=255)

                                                                                   ttCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACa                                                                              <  1:2067597/134‑1 (MQ=255)

                                                                                    tCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGc                                                             >  2:129998/1‑150 (MQ=255)

                                                                                    tCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGc                                                             >  2:605713/1‑150 (MQ=255)

                                                                                      cacaGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCt                                                           >  2:1549417/1‑150 (MQ=255)

                                                                                      cacaGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTAGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCt                                                           >  2:1408853/1‑150 (MQ=255)

                                                                                            ccTGAATGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTAGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGa                                                     <  1:1137733/150‑1 (MQ=255)

                                                                                             cTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAg                                                    <  1:129998/150‑1 (MQ=255)

                                                                                             cTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAg                                                    >  1:1859534/1‑150 (MQ=255)

                                                                                              tGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGt                                                   >  2:183333/1‑150 (MQ=255)

                                                                                              tGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGt                                                   >  1:900613/1‑150 (MQ=255)

                                                                                                aaGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGccttcagacgtggt                                                                                                                                         >  2:1687835‑M1/1‑48 (MQ=255)

                                                                                                aaGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGccttcagacgtggt                                                                                                                                         <  1:1687835‑M1/62‑15 (MQ=255)

                                                                                                    gggTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCAcg                                             <  2:958809/150‑1 (MQ=255)

                                                                                                      gTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGccttcagacgtggt                                                                                                                                         >  2:40440‑M1/1‑42 (MQ=255)

                                                                                                      gTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGccttcagacgtggt                                                                                                                                         <  1:40440‑M1/56‑15 (MQ=255)

                                                                                                        gCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCAcggcgg                                         <  2:1038510/150‑1 (MQ=255)

                                                                                                         ccACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCggg                                        <  2:136950/150‑1 (MQ=255)

                                                                                                          cACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGc                                                             <  1:1338653/128‑1 (MQ=255)

                                                                                                          cACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGc                                                             >  2:1338653/1‑128 (MQ=255)

                                                                                                          cACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCgggg                                       >  1:2241033/1‑150 (MQ=255)

                                                                                                              gggTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTa                                   <  1:183333/150‑1 (MQ=255)

                                                                                                               ggTGCGACGTTAAACCCCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAAATGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTAc                                  <  1:525289/150‑1 (MQ=255)

                                                                                                                  gCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAAc                               <  2:900613/150‑1 (MQ=255)

                                                                                                                   cGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGAtt                                                                                          >  1:1718203/1‑90 (MQ=255)

                                                                                                                   cGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGAtt                                                                                          <  2:1718203/90‑1 (MQ=255)

                                                                                                                    gACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGt                                                                                                              <  2:348059/69‑1 (MQ=255)

                                                                                                                    gACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGt                                                                                                              >  1:348059/1‑69 (MQ=255)

                                                                                                                          cAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGa                       <  1:1561631/150‑1 (MQ=255)

                                                                                                                           aaCATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGAc                      >  1:1952551/1‑150 (MQ=255)

                                                                                                                             cATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAg                            <  2:1641267/142‑1 (MQ=255)

                                                                                                                             cATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAg                            >  1:1641267/1‑142 (MQ=255)

                                                                                                                               tCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTaca                  >  1:1761824/1‑150 (MQ=255)

                                                                                                                                  gCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCg               >  2:2224803/1‑150 (MQ=255)

                                                                                                                                    aTTCACACCACGtctgaaggcgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcc                             <  2:1147583‑M1/134‑123 (MQ=255)

                                                                                                                                    aTTCACACCACGtctgaaggcgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcc                             >  1:1147583‑M1/1‑12 (MQ=255)

                                                                                                                                    aTTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGt                                      <  1:2196573/125‑1 (MQ=255)

                                                                                                                                    aTTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGt                                      >  2:2196573/1‑125 (MQ=255)

                                                                                                                                        acacCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCaa         >  1:2326931/1‑150 (MQ=255)

                                                                                                                                          accacGTCTGAAGGcgtggtgtgaatgctgatgttgaacgtcgcacccagtggcaccccctt                                                                                               <  1:1687835‑M2/62‑49 (MQ=255)

                                                                                                                                          accacGTCTGAAGGcgtggtgtgaatgctgatgttgaacgtcgcacccagtggcac                                                                                                     >  2:40440‑M2/1‑14 (MQ=255)

                                                                                                                                          accacGTCTGAAGGcgtggtgtgaatgctgatgttgaacgtcgcacccagtggcac                                                                                                     <  1:40440‑M2/56‑43 (MQ=255)

                                                                                                                                          accacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCAAcc       >  1:1297883/1‑150 (MQ=255)

                                                                                                                                          accacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCAAcc       >  2:2115974/1‑150 (MQ=255)

                                                                                                                                          accacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCAAcc       >  1:1407817/1‑150 (MQ=255)

                                                                                                                                           ccacGTCTGAAGGcgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcccttgttccagaacacctttaccg      <  1:378425‑M2/150‑138 (MQ=255)

                                                                                                                                           ccacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCAAccc      >  1:270145/1‑150 (MQ=255)

                                                                                                                                            cacGccttcagacgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcccttgttccagaacacctttaccgg     >  1:567517‑M1/1‑4 (MQ=255)

                                                                                                                                            cacGccttcagacgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagg                                        >  1:1490561‑M1/1‑4 (MQ=255)

                                                                                                                                            cacGccttcagacgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagg                                        <  2:1490561‑M1/115‑112 (MQ=255)

                                                                                                                                            cacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTgg                                                                      <  2:1931452/85‑1 (MQ=255)

                                                                                                                                            cacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTgg                                                                      >  1:1931452/1‑85 (MQ=255)

                                                                                                                                            cacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCAcggcg                                          <  2:129593/113‑1 (MQ=255)

                                                                                                                                            cacGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCAcggcg                                          >  1:129593/1‑113 (MQ=255)

                                                                                                                                             acGccttcagacgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcccttgttccagaacacctttaccggc    >  1:180618‑M1/1‑3 (MQ=255)

                                                                                                                                             acGccttcagacgtggtgtgaatgctgatgttgaacgtcgatcccagtggcacaacaaccaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcccttgttccagaacacctttaccggc    >  2:82262‑M1/1‑3 (MQ=255)

                                                                                                                                               gccttcagacgtggtgtgaatgctgatgttgaacgtcgcacccagtggcacccccttcaggactgtggaattcaccgggtcggtctggttgaaggtgcgccgaaaccccagggtgatgttgcccttgttccagaacacctttaccggcgg  >  2:743368‑M1/1‑1 (MQ=255)

GGCCCGCCGGTAAAGGTGTTCTGGAACAAGGGCAACATCACCCTGGGGTTTCGGCGCACCTTCAACCAGACCGACCCGGTGAATTCCACAGTCCTGAAGGGGGTGCCACTGGGTGCGACGTTCAACATCAGCATTCACACCACGTCTGAAGGCGTGGTAACCGTGACGGCCGAATGCAACGGGGTATCCGCTTCGTCGGGCGATTTGCAGCTCGACAGTACCTGGGCTTCACGCCTGTTCGAGTTCCACGGCGGGGTCTACAACCAGGTCGACTACACCGACGCAACCCCCGC  >  NC_002947/4301210‑4301502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.