New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4666548112 (1.200)7 (0.080) 9/232 NT 6.2% coding (268/1854 nt) nuoL NADH‑quinone oxidoreductase subunit L
?NC_002947 = 4666557 109 (1.260)coding (277/1854 nt) nuoL NADH‑quinone oxidoreductase subunit L

Only 100 of 170 total aligned reads displayed.

GCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGATAACCTGCT  >  NC_002947/4666407‑4666696
                                                                                                                                             |                                                                                                                                                      
 ccACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCg                                                                                                                                              >  2:2232567/1‑150 (MQ=255)
  cACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGt                                                                                                                                             <  1:417514‑M2/150‑2 (MQ=255)
   aCGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtg                                                                                                                                            >  1:819663‑M2/1‑148 (MQ=255)
   aCGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtg                                                                                                                                            >  1:1164700‑M2/1‑148 (MQ=255)
    cGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGCGGGCGGCGCGTACAGCCAGCTGCTGTGGCTGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtgg                                                                                                                                           >  1:758058‑M2/1‑147 (MQ=255)
    cGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtgg                                                                                                                                           >  1:243956‑M2/1‑147 (MQ=255)
    cGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtgg                                                                                                                                           >  1:172296‑M2/1‑147 (MQ=255)
       ccgccTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGCCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCAcgccgagcatggtga                                                                                                                                         <  1:1420202‑M1/150‑16 (MQ=255)
        cgccTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGATGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtggtgac                                                                                                                                       >  2:287318‑M2/1‑143 (MQ=255)
          ccTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtggtgaccg                                                                                                                                     <  1:2056294‑M2/150‑10 (MQ=255)
           cTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCg‑g                                                                                                                                   >  2:276817/1‑150 (MQ=255)
               gTCATCTGGCAGTTCAACGTCGCCCTGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTc                                                                                                                               <  1:1699095/150‑1 (MQ=255)
               gTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTc                                                                                                                               >  2:1869162/1‑150 (MQ=255)
                tCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCg                                                                                                                              <  1:1237647/150‑1 (MQ=255)
                tCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCg                                                                                                                              <  1:862749/150‑1 (MQ=255)
                   tCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCAtggtgaccgacag                                                                                                                                 <  2:1683642‑M2/145‑14 (MQ=255)
                   tCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCAtggtgaccgacag                                                                                                                                 >  1:1683642‑M2/1‑132 (MQ=255)
                      ggCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTcc                                                                                                                        >  2:652281/1‑150 (MQ=255)
                       gCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCt                                                                                                                       >  2:1116227/1‑150 (MQ=255)
                           ttCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtggtgac                                                                                                                                       >  1:611246‑M2/1‑124 (MQ=255)
                           ttCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATc                                                                                                                   <  2:1597444/150‑1 (MQ=255)
                           ttCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATc                                                                                                                   >  1:1991190/1‑150 (MQ=255)
                            tCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATcc                                                                                                                  <  2:1126084/150‑1 (MQ=255)
                              accGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGCACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGCCCG‑GTGTCGGCTTCCTGATCCAc                                                                                                                <  2:1123473/148‑1 (MQ=255)
                              aaCGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCAc                                                                                                                <  1:562854/150‑1 (MQ=255)
                              aaCGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCAc                                                                                                                <  2:1415582/150‑1 (MQ=255)
                                 gTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTg                                                                                                             >  1:815858/1‑150 (MQ=255)
                                   cGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGtt                                                                                                           <  2:815858/150‑1 (MQ=255)
                                    gCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTc                                                                                                          <  2:206237/150‑1 (MQ=255)
                                     ccccGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑gtgt                                                                                                                                <  1:963328/127‑1 (MQ=255)
                                     ccccGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGAACG‑GTGTCGGCTTCCTGATCCACCTGTTCg                                                                                                         >  2:1002849/1‑150 (MQ=255)
                                      cccGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGc                                                                                                        >  1:694211/1‑150 (MQ=255)
                                      cccGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGCTGGCCG‑GTGTCGGCTTCCTGATCCACCTGTTCGc                                                                                                        >  2:1246783/1‑150 (MQ=255)
                                      cccGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCGTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGc                                                                                                        >  2:83163/1‑150 (MQ=255)
                                            tGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTg                                                                                                  >  1:1350031/1‑150 (MQ=255)
                                                    gcgcGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGc                                                                                          <  1:1869162/150‑1 (MQ=255)
                                                    gcgcGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGGCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGCTCCCCCTGTTCGCATCCTGGTACATGc                                                                                          <  2:31697/150‑1 (MQ=255)
                                                            agccagcTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGaa                                                                                  <  1:1169644/150‑1 (MQ=255)
                                                            agccagcTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGaa                                                                                  >  1:1094591/1‑150 (MQ=255)
                                                            agccagcTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCAtggtgaccgacaggccgtcc                                                                                                                          <  2:1917244‑M2/111‑21 (MQ=255)
                                                            agccagcTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCAtggtgaccgacaggccgtcc                                                                                                                          >  1:1917244‑M2/1‑91 (MQ=255)
                                                              ccagcTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGCCGGTCACCACGC‑CGAGCAtggtgaccgacag                                                                                                                                 >  2:1625946‑M2/1‑89 (MQ=255)
                                                              ccagcTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGCCGGTCACCACGC‑CGAGCAtggtgaccgacag                                                                                                                                 <  1:1625946‑M2/102‑14 (MQ=255)
                                                                     ctgTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCAcgccgagcatggtga                                                                                                                                         <  2:765631‑M1/88‑16 (MQ=255)
                                                                     ctgTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCAcgccgagcatggtga                                                                                                                                         >  1:765631‑M1/1‑73 (MQ=255)
                                                                        tgGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTcg                                                                      >  1:2166631/1‑150 (MQ=255)
                                                                         ggCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTcgc                                                                     <  2:694211/150‑1 (MQ=255)
                                                                          gCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTcgcg                                                                    >  2:1021317/1‑150 (MQ=255)
                                                                           cAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGtgg                                                                                                                                           >  1:2035207‑M2/1‑76 (MQ=255)
                                                                            aGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGct                                                                  >  2:40762/1‑150 (MQ=255)
                                                                                   gTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGct                                                                  >  1:2129464/1‑143 (MQ=255)
                                                                                       gTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCCGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTac                                                       >  1:882880/1‑150 (MQ=255)
                                                                                         ggACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTacac                                                     <  1:652281/150‑1 (MQ=255)
                                                                                             ggCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAAc                                                 >  1:1762307/1‑150 (MQ=255)
                                                                                             ggCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAAc                                                 >  1:1384040/1‑150 (MQ=255)
                                                                                              gCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAAcc                                                >  2:2384243/1‑150 (MQ=255)
                                                                                              gCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCCTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAAcc                                                >  1:1008843/1‑150 (MQ=255)
                                                                                               cTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTc                                                                                                                                                   <  1:1135211/52‑1 (MQ=255)
                                                                                                ttCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTtctc                                                           <  1:742920/137‑1 (MQ=255)
                                                                                                 tCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGt                                             <  2:1350031/150‑1 (MQ=255)
                                                                                                   gcgcCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCAcgccgagcatggtgac                                                                                                                                        >  2:1294595‑M1/1‑43 (MQ=255)
                                                                                                   gcgcCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCAcgccgagcatggtgac                                                                                                                                        <  1:1294595‑M1/59‑17 (MQ=255)
                                                                                                           cTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGCAGTCAG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAg                                   >  2:928951/1‑150 (MQ=255)
                                                                                                              cACCCTGTACCTGGACGGCCTGTCGGTCACCCTGCTCG‑GTGGCGT‑ACCGCGTGGCGGCTGCCTGATCCACCTGTGCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCAt                                <  1:1116227/150‑1 (MQ=255)
                                                                                                              cACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCgg                                                                             <  1:1006899/105‑1 (MQ=255)
                                                                                                                 ccTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCt                             >  2:2255488/1‑150 (MQ=255)
                                                                                                                   tGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTa                                                                                               <  1:1548310/82‑1 (MQ=255)
                                                                                                                   tGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTa                                                                                               >  2:1548310/1‑82 (MQ=255)
                                                                                                                   tGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGGTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGt                           >  2:1484841/1‑150 (MQ=255)
                                                                                                                      aCCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATc                                                                                                     <  2:1753997/73‑1 (MQ=255)
                                                                                                                      aCCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTcc                        >  2:963262/1‑150 (MQ=255)
                                                                                                                        cTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCAc                                                                                                                >  2:1090322/1‑60 (MQ=255)
                                                                                                                        cTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCt                                               >  1:132524/1‑125 (MQ=255)
                                                                                                                        cTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTg                      >  1:2073989/1‑150 (MQ=255)
                                                                                                                        cTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTg                      <  1:1951405/150‑1 (MQ=255)
                                                                                                                        cTGGAAGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTg                      >  2:874558/1‑150 (MQ=255)
                                                                                                                         tGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGa                     <  1:2232567/150‑1 (MQ=255)
                                                                                                                         tGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGa                     >  2:1389666/1‑150 (MQ=255)
                                                                                                                          ggACGGCCTGTCGGTCACCAtgctcggcgtggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctggct                                                             <  2:1917244‑M1/111‑92 (MQ=255)
                                                                                                                                ccTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTgg              <  1:874558/150‑1 (MQ=255)
                                                                                                                                ccTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTAAGACTCGTAGTCCTACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTgg              <  1:2255488/150‑1 (MQ=255)
                                                                                                                                ccTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCCTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTgg              <  2:1008843/150‑1 (MQ=255)
                                                                                                                                ccTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTCTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTgg              <  1:978562/150‑1 (MQ=255)
                                                                                                                                 cTGTCGGTCACCAtgctcggcgtggtgaccggcaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctgg                                                               <  1:1625946‑M1/102‑90 (MQ=255)
                                                                                                                                 cTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGc             >  2:2152135/1‑150 (MQ=255)
                                                                                                                                 cTGTCGGTCACCATGCTCG‑GCGTGGGGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTTGc             >  2:884804/1‑150 (MQ=255)
                                                                                                                                   gTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGa           <  1:40762/150‑1 (MQ=255)
                                                                                                                                     cGGTCACCAcgccgagcatggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctggctgtacgcgccgccctcaggcggggcgacgttgaactgccagatgacgtagg           >  1:313261‑M1/1‑9 (MQ=255)
                                                                                                                                       gTCACCAcgccgagcatggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctggctgtacgcgccgccctcaggcggggcgacgttgaa                            <  2:611246‑M1/131‑125 (MQ=255)
                                                                                                                                       gTCACCATGCTCG‑GCGtggtgaccgacaggccgtccaggtacagggtgaagttcggcgc                                                                                                   >  2:1294595‑M2/1‑16 (MQ=255)
                                                                                                                                       gTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGATAAc       <  1:1040022/150‑1 (MQ=255)
                                                                                                                                        tCACCATGCTCG‑GCGtggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctggctgtacgcgccggcctcaggcggggcgacgttgaactgccagatgacgtaggcgg       <  1:1420202‑M2/150‑136 (MQ=255)
                                                                                                                                          aCCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGATAACctg    >  1:1747000/1‑150 (MQ=255)
                                                                                                                                           ccacgccgagcatggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctggctgtacgcgccgccctcaggcggggcgacgttgaactgccagatgacgtaggcggccg     >  1:243956‑M1/1‑3 (MQ=255)
                                                                                                                                           ccacgccgagcatggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccgtccaccgacatccactg                                                                            <  2:2035207‑M1/79‑77 (MQ=255)
                                                                                                                                           ccATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGATAACctgc   >  1:1910372/1‑150 (MQ=255)
                                                                                                                                            cacaccgagcatggtgaccgacaggccgtccaggtacagggtgaagttcggcgcgaagccggccaccgacatccactgccacagcagctggctgtacacgccgccctcaggcggggcgacgctgaactgccagatgacgtaggcggccga    >  2:148097‑M1/1‑2 (MQ=255)
                                                                                                                                            cATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCATCATGCTGTTCCTGATCCTTGGCGATAACctgct  >  2:419145/1‑150 (MQ=255)
                                                                                                                                            cATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGATAACctgct  >  1:2280917/1‑150 (MQ=255)
                                                                                                                                             acgccgagcatggttaccgacaggccttccaggaacagggtgaagttcggcgcgaagccgtccaccgacatccactgccacagcagctggctgtacgcgccgccctcaggcggggcgacgttgaactgccagatgacgtaggcggccgtg   <  2:957495‑M1/150‑150 (MQ=255)
                                                                                                                                             |                                                                                                                                                      
GCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCG‑GTGTCGGCTTCCTGATCCACCTGTTCGCATCCTGGTACATGCGTGGCGAAGCCGGCTACTCGCGCTTCTTCTCGTACACCAACCTGTTCATCGCCAGCATGCTGTTCCTGATCCTTGGCGATAACCTGCT  >  NC_002947/4666407‑4666696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.