New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5240403 =78 (0.840)5 (0.060) 5/242 NT 6.2% intergenic (‑41/‑84) ldh/PP_4618 leucine dehydrogenase/hypothetical protein
?NC_002947 5240429 = 75 (0.830)intergenic (‑67/‑58) ldh/PP_4618 leucine dehydrogenase/hypothetical protein

CCGGGCCCAAATGCTCACTGTGGATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGC  >  NC_002947/5240254‑5240551
                                                                                                                                                     |                                                                                                                                                    
ggtcgtgctcggcagcaatccacagtgcggcttccagcaggtcgacaggcccgcgttccaggcaggccaggcaggcttgacgtggcttcatggggtatctccacccacgtttgagtattagccgtggcgcgtggtttcgtccagtggtcc                                                                                                                                                      >  1:737950‑M1/150‑150 (MQ=255)
ccGGGCCCAAATGCTCACTGTGGATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCAc                                                                                                                                                      <  1:2171700/150‑1 (MQ=255)
  tcgtgctcggcagcaatccacagtgcggcttccagcaggtcgacaggctcgcgttccaggcaggccaggcaggcttgacgtggcttcatggggtatctccacacacgtttgagtattagccgtggcgcgtggtttcgtccagtggtccgg                                                                                                                                                    >  1:197680‑M1/148‑150 (MQ=255)
    gCCCAAATGCTCACTGTGGATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCAcggcc                                                                                                                                                  <  1:1977172/150‑1 (MQ=255)
              tCACTGTGGATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGa                                                                                                                                        >  2:2348345/1‑150 (MQ=255)
               cACTGTGGATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGAGTATTGACTTGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGAc                                                                                                                                       <  2:2157650/150‑1 (MQ=255)
                      gATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGAcgccgccg                                                                                                                                >  1:1619402/1‑150 (MQ=255)
                       aTTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGAcgccgccgc                                                                                                                               >  1:1525684/1‑150 (MQ=255)
                         tgcggcttccagcaggtcgacaggctcgcgttccaggcaggccaggcaggcttgacgtggcttcatggggtatctccacacacgtttgagtattagccggggcgcgtggtttcgtccagtggtcCGGCCTCGGCCTTGACGccgccgccg                                                                                                                             >  1:1079353‑M1/125‑150 (MQ=255)
                         tGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGccgcctccg                                                                                                                             <  2:2189844/150‑1 (MQ=255)
                           ccACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGa                                                                                                                           >  1:699915/1‑150 (MQ=255)
                           ccACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGa                                                                                                                           >  1:499325/1‑150 (MQ=255)
                           ccACAACGGCTTTCAGGCCCGTAGGCGGGGCCTAGGGCAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGa                                                                                                                           >  1:564724/1‑150 (MQ=255)
                             acaACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGAcc                                                                                                                         >  2:973580/1‑150 (MQ=255)
                                aCGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACt                                                                                                                      <  2:699915/150‑1 (MQ=255)
                                 cGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTg                                                                                                                     <  2:1361815/150‑1 (MQ=255)
                                    cTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGAc                                                                                                                  <  1:261319/150‑1 (MQ=255)
                                        cAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTCCGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGaaa                                                                                                              <  2:1128423/150‑1 (MQ=255)
                                         aGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGCCGAAAc                                                                                                             >  1:984232/1‑150 (MQ=255)
                                         aGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGaaa                                                                                                              <  1:1012481/149‑1 (MQ=255)
                                         aGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGaaa                                                                                                              >  2:1012481/1‑149 (MQ=255)
                                          ggCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAAcc                                                                                                            >  1:2032496/1‑150 (MQ=255)
                                          ggCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAAcc                                                                                                            >  1:2031284/1‑150 (MQ=255)
                                             ccGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCAcg                                                                                                         <  2:2032496/150‑1 (MQ=255)
                                             ccGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCAcg                                                                                                         <  2:2031284/150‑1 (MQ=255)
                                                      ggTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGc                                                                                                >  2:2326308/1‑150 (MQ=255)
                                                        tCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTTCGAGGTGTTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTa                                                                                              <  2:1302219/150‑1 (MQ=255)
                                                        tCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTa                                                                                              <  1:2326308/150‑1 (MQ=255)
                                                          aTTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAAt                                                                                            <  1:1157891/150‑1 (MQ=255)
                                                            tGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATAc                                                                                          <  1:2351558/150‑1 (MQ=255)
                                                            ggcaggccaggcaggcttgacgtggcttcatggggtatctccacacacgtttgagtattagccgtggcgcgtggtttcgtccagtggtcCGGCCTCGGCCTTGACGCCGCCGCCGGACCACt                                                                                                                      >  2:47376‑M1/90‑122 (MQ=255)
                                                            ggcaggccaggcaggcttgacgtggcttcatggggtatctccacacacgtttgagtattagccgtggcgcgtggtttcgtccagtggtcCGGCCTCGGCCTTGACGCCGCCGCCGGACCACt                                                                                                                      <  1:47376‑M1/33‑1 (MQ=255)
                                                              aaCAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATAccc                                                                                        >  1:1937843/1‑148 (MQ=255)
                                                                 aGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCtt                                                                                                                                          <  2:1388486/97‑1 (MQ=255)
                                                                 aGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCtt                                                                                                                                          >  1:1388486/1‑97 (MQ=255)
                                                                  ggTGCAGTGACTGCGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTTCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAAc                                                                                    <  2:1296023/150‑1 (MQ=255)
                                                                      cAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTg                                                                                                                     <  1:370278/113‑1 (MQ=255)
                                                                      cAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTg                                                                                                                     >  2:370278/1‑113 (MQ=255)
                                                                      cAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACgtgt                                                                                <  1:1464279/150‑1 (MQ=255)
                                                                      cAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACgtgt                                                                                <  1:973580/150‑1 (MQ=255)
                                                                      cAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACCCAAACgtgt                                                                                <  2:1937843/150‑1 (MQ=255)
                                                                       aGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACgtgtg                                                                               <  1:710168/150‑1 (MQ=255)
                                                                        gTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACgtgtgt                                                                              >  1:1229711/1‑150 (MQ=255)
                                                                           aCTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGga                                                                           <  2:499325/150‑1 (MQ=255)
                                                                            cTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCAcggcctc                                                                                                                                                <  1:2150691/80‑1 (MQ=255)
                                                                            cTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCAcggcctc                                                                                                                                                >  2:2150691/1‑80 (MQ=255)
                                                                                 tACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATAcc                                                                     >  1:2001682/1‑150 (MQ=255)
                                                                                    gggTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCa                                                                  >  2:1684692/1‑150 (MQ=255)
                                                                                    gggTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCa                                                                  >  1:2175141/1‑150 (MQ=255)
                                                                                    gggTGCTTTGCATCAGCGCGAACATAGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGCACGAAACAACGCGCCAAGGCTAATACTCAAACGTGGGTGGAGATACCCCa                                                                  >  2:669116/1‑150 (MQ=255)
                                                                                        gCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGaa                                                              <  1:67889/150‑1 (MQ=255)
                                                                                          tttGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACCCAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGc                                                            >  1:1331683/1‑150 (MQ=255)
                                                                                            tGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCa                                                          <  1:892582/150‑1 (MQ=255)
                                                                                              cATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGAGTGGAGATACCCACTGAAGCCACg                                                        >  1:701390/1‑150 (MQ=255)
                                                                                                tCAGCGCGAACATCGACCGGCTCCCCTACGGGGGGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTc                                                      >  1:1871241/1‑150 (MQ=255)
                                                                                                tCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTc                                                      >  1:394318/1‑150 (MQ=255)
                                                                                                  aGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCaa                                                    <  2:394318/150‑1 (MQ=255)
                                                                                                   gcgcGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAg                                                   >  1:181244/1‑150 (MQ=255)
                                                                                                    cgcgAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAgc                                                  <  2:2001682/150‑1 (MQ=255)
                                                                                                      acacacgtttgagtattagccgtggcgcgtggtttcgtccagtggtcCGGCCTCGGCCTTGACGCCGCCGCCGGAc                                                                                                                          >  2:448161‑M1/48‑76 (MQ=255)
                                                                                                      acacacgtttgagtattagccgtggcgcgtggtttcgtccagtggtcCGGCCTCGGCCTTGACGCCGCCGCCGGAc                                                                                                                          <  1:448161‑M1/29‑1 (MQ=255)
                                                                                                           aTCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCCAgcctgcctg                                           >  2:1086866/1‑150 (MQ=255)
                                                                                                            tCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTTGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAgcctgcctgg                                          >  1:212070/1‑150 (MQ=255)
                                                                                                             cGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAgcctgcctggc                                         >  1:2138376/1‑150 (MQ=255)
                                                                                                               aCCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAgcctgcctggcct                                       >  1:70803/1‑150 (MQ=255)
                                                                                                                   gCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAgcctgcctggcctgcct                                   >  2:1753013/1‑150 (MQ=255)
                                                                                                                    cgccccTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAgcctgcctggcctgcctg                                  <  1:2198029/148‑1 (MQ=255)
                                                                                                                       cccTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGaa                               >  2:1136297/1‑150 (MQ=255)
                                                                                                                        ccTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAAc                              <  2:817841/150‑1 (MQ=255)
                                                                                                                         cTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAAcg                             >  1:2219806/1‑150 (MQ=255)
                                                                                                                          tACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGTCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAAcgc                            >  2:1280486/1‑150 (MQ=255)
                                                                                                                          tACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGaa                               >  1:2301760/1‑147 (MQ=255)
                                                                                                                          tACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGaa                               <  2:2301760/147‑1 (MQ=255)
                                                                                                                            cGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGa                          <  1:1136297/150‑1 (MQ=255)
                                                                                                                            cGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGa                          <  2:1114333/150‑1 (MQ=255)
                                                                                                                            cGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGAGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGa                          <  2:701390/150‑1 (MQ=255)
                                                                                                                                gggCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGCCGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAAGACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCt                      <  2:411006/148‑1 (MQ=255)
                                                                                                                                gTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCt                      <  2:181244/150‑1 (MQ=255)
                                                                                                                                gTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCt                      <  2:411144/150‑1 (MQ=255)
                                                                                                                                   cTCCTTCCCGTATAGGCACGGCCTCGGCCTTGACGCCGCAGCCGGCCCCCTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACACCATGAAGCCACGTCACGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTc                   <  2:1331683/150‑1 (MQ=255)
                                                                                                                                   cTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTc                   >  1:1133252/1‑150 (MQ=255)
                                                                                                                                   cTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTc                   >  2:2143674/1‑150 (MQ=255)
                                                                                                                                     ccTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGa                 >  2:2160971/1‑150 (MQ=255)
                                                                                                                                      cTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGAc                >  2:1578923/1‑150 (MQ=255)
                                                                                                                                          cAGTATAGGCACGGCCTCGGCCTTGACGCCGCAGACTTAGCACGGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACctgc            <  2:564724/150‑1 (MQ=255)
                                                                                                                                           aGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACctgct           <  2:530334/150‑1 (MQ=255)
                                                                                                                                            gTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACctgctg          <  1:2348345/150‑1 (MQ=255)
                                                                                                                                                  gCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGcc                                                           <  1:73308/95‑1 (MQ=255)
                                                                                                                                                  gCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGcc                                                           >  2:73308/1‑95 (MQ=255)
                                                                                                                                                  gCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGATCCTGTCGACCTGCTGGAAGcc    >  2:1931124/1‑150 (MQ=255)
                                                                                                                                                  gCACGCCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGcc    >  1:1944961/1‑150 (MQ=255)
                                                                                                                                                   cACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACgtgtg                                                                               >  2:461322/1‑74 (MQ=255)
                                                                                                                                                   cACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACgtgtg                                                                               <  1:461322/74‑1 (MQ=255)
                                                                                                                                                    aCGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGc  >  1:2291465/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CCGGGCCCAAATGCTCACTGTGGATTGCCACAACGGCTTTCAGGCCCGTAGGCGGGTCATTGAACAGGTGCAGTGACTGGGTACGGGTGCTTTGCATCAGCGCGAACATCGACCGGCTCCCCTACGAGGTGCTCCTTCCAGTATAGGCACGGCCTCGGCCTTGACGCCGCCGCCGGACCACTGGACGAAACCACGCGCCACGGCTAATACTCAAACGTGTGTGGAGATACCCCATGAAGCCACGTCAAGCCTGCCTGGCCTGCCTGGAACGCGAGCCTGTCGACCTGCTGGAAGCCGC  >  NC_002947/5240254‑5240551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.