New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5843194 =82 (0.880)7 (0.080) 6/240 NT 8.6% coding (266/486 nt) PP_5121 hypothetical protein
?NC_002947 5843224 = 70 (0.780)coding (296/486 nt) PP_5121 hypothetical protein

Only 100 of 102 total aligned reads displayed.

CGACGACCTGCCCCTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGC  >  NC_002947/5843045‑5843343
                                                                                                                                                     |                                                                                                                                                      
ttcggggcgttcgtaccaggccatttgcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggt                                                                                                                                                        <  1:754778‑M1/1‑1 (MQ=255)
cgacgacCTGCCCCTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCt                                                                                                                                                        >  1:420822/1‑150 (MQ=255)
 tcggggcgttcgtaccaggccatttgcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccatacgccggTc                                                                                                                                                       >  2:1856865‑M1/149‑150 (MQ=255)
 tcggggcgttcgtaccaggccatttgcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTc                                                                                                                                                       <  2:420822‑M1/2‑1 (MQ=255)
 gacgacCTGCCCCTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTc                                                                                                                                                       >  1:1058998/1‑150 (MQ=255)
 gacgacCTGCCCCTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGAGGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTc                                                                                                                                                       >  1:2211005/1‑150 (MQ=255)
   cgacCTGCCCCTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAg                                                                                                                                                     <  1:255960/150‑1 (MQ=255)
    gggcgttcgtaccaggccatttgcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGc                                                                                                                                                    <  1:1676011‑M1/5‑1 (MQ=255)
          ccccTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCGACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCg                                                                                                                                              >  1:555656/1‑150 (MQ=255)
          ccccTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCTATTGTTCGACGTGCTCAGCCTGCCg                                                                                                                                              >  1:1726927/1‑150 (MQ=255)
            ccTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCt                                                                                                                                            >  2:251235/1‑150 (MQ=255)
            ccTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCt                                                                                                                                            >  1:1248571/1‑150 (MQ=255)
            actgctgCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGCTCGACGTGCTCAGCCTGCCGcc                                                                                                                                            >  2:1676011/2‑149 (MQ=255)
             ctgctgCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGc                                                                                                                                             >  2:1776828/1‑148 (MQ=255)
             ctgctgCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGc                                                                                                                                             <  1:1776828/148‑1 (MQ=255)
              tgctgcGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGa                                                                                                                                          <  1:210335/150‑1 (MQ=255)
              tgctgcGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGa                                                                                                                                          <  2:1248571/150‑1 (MQ=255)
                caggccatttgcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGc                                                                                                                                                    >  1:1545388‑M1/134‑138 (MQ=255)
                caggccatttgcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGc                                                                                                                                                    <  2:1545388‑M1/5‑1 (MQ=255)
                 tgcgtgcgCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTc                                                                                                                                       <  2:608853/150‑1 (MQ=255)
                          tGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGc                                                                                                                             >  1:1857552/1‑150 (MQ=255)
                          gcagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGCCTGCCGCTGACTC‑GCGGCCCGc                                                                                                                             >  2:2099970‑M1/124‑150 (MQ=255)
                           gATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCt                                                                                                                            <  1:1412949/150‑1 (MQ=255)
                           cagcagttgcagcaacgaggcgtgccccatgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGCCTGCCGCTGACTC‑GCGGCCCGCt                                                                                                                            >  1:2439781‑M1/123‑150 (MQ=255)
                            aTCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTg                                                                                                                           >  2:1194767/1‑150 (MQ=255)
                             tCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGa                                                                                                                          <  2:555656/150‑1 (MQ=255)
                               ccGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGAcc                                                                                                                        <  2:1980884/150‑1 (MQ=255)
                               ccGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGAcc                                                                                                                        >  2:1898053/1‑150 (MQ=255)
                                cGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACACGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCg                                                                                                                       <  1:1870958/150‑1 (MQ=255)
                                cGGTGGGCCTGGCCGGTACAAAGGCCACCGATGCGCCGGTGTTGCGCAGGGTCCACAAAAAGCTGGCGACGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTACGACGTGCTCAGCCTGCCGCTGACCC‑GCGGCCCGCTGACCg                                                                                                                       >  2:1108692/1‑150 (MQ=255)
                                  gtggtCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     >  2:1347305/1‑150 (MQ=255)
                                  gtggtCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     <  1:2135965/150‑1 (MQ=255)
                                  gtggtCCCGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     <  1:66134/150‑1 (MQ=255)
                                    ggtCCTTGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGt                                                                                                                   <  1:728385/150‑1 (MQ=255)
                                     gtCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACTGGCGTc                                                                                                                  >  1:1904719/1‑150 (MQ=255)
                                       ccTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTg                                                                                                                <  2:735196/150‑1 (MQ=255)
                                        cTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTgg                                                                                                               <  1:1194767/150‑1 (MQ=255)
                                        cTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTgg                                                                                                               >  2:1757703/1‑150 (MQ=255)
                                         tgcccGGTCCACAGGCCACCGAGGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTggg                                                                                                              >  2:2111677/4‑150 (MQ=255)
                                          ggCCGGTACACATGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCATCCGGCAATTGTTAGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTgggg                                                                                                             <  2:1325143/150‑1 (MQ=255)
                                               gTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCt                                                                                                        >  1:2421200/1‑150 (MQ=255)
                                                 acacAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTgg                                                                                                      <  1:1726691/150‑1 (MQ=255)
                                                   acaGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTgggg                                                                                                    >  2:2318406/1‑150 (MQ=255)
                                                   acaGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTgggg                                                                                                    <  2:1231986/150‑1 (MQ=255)
                                                     aGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGcc                                                                                                  >  1:1591717/1‑150 (MQ=255)
                                                     aGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATCGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGcc                                                                                                  >  1:541233/1‑150 (MQ=255)
                                                       gCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCaa                                                                                                >  1:387443/1‑150 (MQ=255)
                                                        tgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacccgcgtggcgccagcttggccccagctgccccagacgccggTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     >  1:1908760‑M1/94‑128 (MQ=255)
                                                        tgcgtagcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacccgcgtggcgccagcttggccccagctgccccagacgccggTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     <  2:1908760‑M1/35‑1 (MQ=255)
                                                           ccGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTGGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTGGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCCTCTGTGGCAGCTGGGGCCAAGCTg                                                                                            <  2:528673/150‑1 (MQ=255)
                                                             gATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGgc                                                                                          <  1:1347305/150‑1 (MQ=255)
                                                              gcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     >  2:2109719‑M1/88‑122 (MQ=255)
                                                              gcaggttcagcgagctgtcctgccagcgttgcaggaacgccgtgacctgcgtggcgccagcttggccccagctgccccagacgccggTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGc                                                                                                                     <  1:2109719‑M1/35‑1 (MQ=255)
                                                                   ccGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTc‑g                                                                                                                                     >  2:2199364/1‑101 (MQ=255)
                                                                   ccGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTc‑g                                                                                                                                     <  1:2199364/101‑1 (MQ=255)
                                                                     ggTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCa                                                                                  <  1:1757703/150‑1 (MQ=255)
                                                                                   tCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCaa                                                                                                <  1:84896/122‑1 (MQ=255)
                                                                                      acaacaAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGc                                                                 >  2:1430200/1‑150 (MQ=255)
                                                                                        aacaaGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCaa                                                               >  2:1639345/1‑150 (MQ=255)
                                                                                         acaaGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAAc                                                              <  1:1430200/150‑1 (MQ=255)
                                                                                            aGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACTGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCt                                                           <  2:1904719/150‑1 (MQ=255)
                                                                                            aGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCt                                                           <  2:1591717/150‑1 (MQ=255)
                                                                                              cTGGCGTCGTTGTCGCCGTAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTgg                                                         <  1:901895/150‑1 (MQ=255)
                                                                                                   gtcgtTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGa                                                    <  2:1058998/150‑1 (MQ=255)
                                                                                                    tcgtTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGGTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGAc                                                   <  2:800569/150‑1 (MQ=255)
                                                                                                          tCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCg                                             >  2:476812/1‑150 (MQ=255)
                                                                                                            gCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCt                                           >  2:754778/1‑150 (MQ=255)
                                                                                                            gCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCt                                           >  1:810742/1‑150 (MQ=255)
                                                                                                                gAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGccc                                                                                                                               >  1:1566680/1‑62 (MQ=255)
                                                                                                                gAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGccc                                                                                                                               <  2:1566680/62‑1 (MQ=255)
                                                                                                                gAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAAc                                       <  2:387443/150‑1 (MQ=255)
                                                                                                                     gCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCt                                  <  1:1898053/150‑1 (MQ=255)
                                                                                                                     gCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCACCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCGACGCTGGCAGGACAGCTCCCTGAACCTGCt                                  >  2:1280271/1‑150 (MQ=255)
                                                                                                                      cTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTa                                 >  2:246345/1‑150 (MQ=255)
                                                                                                                       tCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCtactac                                >  2:1710987/1‑150 (MQ=255)
                                                                                                                       tCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTAc                                >  1:853625/1‑150 (MQ=255)
                                                                                                                       tCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTAc                                >  1:403805/1‑150 (MQ=255)
                                                                                                                           gCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGCCTC‑GCGGCCCGCTGACCGGCGTCGGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCAt                            <  2:2245940/150‑1 (MQ=255)
                                                                                                                           gCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCAt                            >  2:646296/1‑150 (MQ=255)
                                                                                                                             tCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATgg                          >  1:1527473/1‑150 (MQ=255)
                                                                                                                             tCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATgg                          >  1:2365099/1‑150 (MQ=255)
                                                                                                                               aaacGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGgc                                                                                          >  2:594949/4‑84 (MQ=255)
                                                                                                                               aCCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGgc                                                                                          <  1:594949/84‑1 (MQ=255)
                                                                                                                                 ccGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGc                                                                         <  2:58173/99‑1 (MQ=255)
                                                                                                                                 ccGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGc                                                                         >  1:58173/1‑99 (MQ=255)
                                                                                                                                 ccGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGTGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCa                      >  1:1399784/1‑150 (MQ=255)
                                                                                                                                 ccGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCa                      >  1:977062/1‑150 (MQ=255)
                                                                                                                                  cGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCACAGCTGTCATGACAGCTCGCTGAACCTGCTACGCATGGGGCAc                     >  2:2410163/1‑150 (MQ=255)
                                                                                                                                       aTTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGCACCTGTTATGCATGGGGCACGCCTc                <  2:810742/150‑1 (MQ=255)
                                                                                                                                       aTTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTc                >  1:1633231/1‑150 (MQ=255)
                                                                                                                                          ccagacgccggTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGtt             <  1:219175‑M1/139‑1 (MQ=255)
                                                                                                                                             cGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTtgct          <  2:541233/150‑1 (MQ=255)
                                                                                                                                              gACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTtgctg         >  2:607594/1‑150 (MQ=255)
                                                                                                                                               aCGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACgg                                                                          <  2:111585/84‑1 (MQ=255)
                                                                                                                                               aCGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACgg                                                                          >  1:111585/1‑84 (MQ=255)
                                                                                                                                               aCGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCAt                            >  2:595695/1‑130 (MQ=255)
                                                                                                                                               aCGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCAt                            <  1:595695/130‑1 (MQ=255)
                                                                                                                                                 gTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGTGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCaa      <  2:1399784/150‑1 (MQ=255)
                                                                                                                                                  tGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAAc     <  1:2200669/150‑1 (MQ=255)
                                                                                                                                                     TCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAActgc  >  1:1469095‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CGACGACCTGCCCCTGCTGCGTGCGCTGATCCCGGTGGTCCTGGCCGGTACACAGGCCACCGATGCGCCGGTGTTGCGCAGCCTCGACAACAAGCTGGCGTCGTTGTCGCCGGAAATGCTCAAGCTCACCCGGCAATTGTTCGACGTGCTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGC  >  NC_002947/5843045‑5843343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.