BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4386290	78 (0.840)	5 (0.060)	5/238	NT	6.3%	coding (163/501 nt)	PP_3862	assembly protein
*	?	NC_002947	= 4386310	75 (0.840)	5 (0.060)	5/238	NT	6.3%	coding (143/501 nt)	PP_3862	assembly protein

Only 100 of 107 total aligned reads displayed.

GCTTGAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTGGGTTT  >  NC_002947/4386161‑4386459

gCTTGAGCACACCCCGGTCGCCTTCGTCGGTGTACAAGGCTACTCCACCGCCCTGCAGGCCGGGCAGGCGGTCCCGCTGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCaa                                                                                                                                                       <  2:153103/150‑1 (MQ=255)

gCTTGAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCaa                                                                                                                                                       >  2:1816337/1‑150 (MQ=255)

    gAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgg                                                                                                                                                   >  1:266628‑M2/1‑146 (MQ=255)

     aGCACACCCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  >  2:1546392‑M2/1‑145 (MQ=255)

     aGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  >  2:1921792‑M2/1‑145 (MQ=255)

      gCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgggc                                                                                                                                                 <  2:1013997‑M2/150‑7 (MQ=255)

      gCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgggc                                                                                                                                                 <  2:116395‑M2/150‑7 (MQ=255)

      gCACAACACGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgggc                                                                                                                                                 <  2:524150‑M2/150‑7 (MQ=255)

       cacaACACGGTCGCATTCGTCGGTGTAAAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCa                                                                                                                                                <  2:1722518/150‑1 (MQ=255)

        acaACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAg                                                                                                                                               >  1:1005258/1‑150 (MQ=255)

        acaACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAg                                                                                                                                               >  1:1543723/1‑150 (MQ=255)

          tccccGGTCGCCTTCGTCGGTGTACAAGGCCACTTCCCCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGa                                                                                                                                             <  1:1543613/148‑1 (MQ=255)

               ggTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTaa                                                                                                                                        <  1:1856130/150‑1 (MQ=255)

                 tCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAAc                                                                                                                                      <  2:221874/150‑1 (MQ=255)

                    ccTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCg                                                                                                                                   >  2:1160832/1‑150 (MQ=255)

                     cTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGt                                                                                                                                  >  2:343366/1‑150 (MQ=255)

                      ttCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTa                                                                                                                                 >  1:1124020/1‑150 (MQ=255)

                               gtACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAg                                                                                                                        <  1:1628250/150‑1 (MQ=255)

                               gtACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAg                                                                                                                        <  2:125873/150‑1 (MQ=255)

                                   aaGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGgtgt                                                                                                                    <  2:1269466/150‑1 (MQ=255)

                                    aGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGtt                                                                                                                   <  1:964432/150‑1 (MQ=255)

                                       ccACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGCCTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCa                                                                                                                >  2:31429/1‑150 (MQ=255)

                                       ccACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCa                                                                                                                <  2:197634/150‑1 (MQ=255)

                                        cACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCAt                                                                                                               <  1:1816337/150‑1 (MQ=255)

                                         aCTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATg                                                                                                              <  2:1124020/150‑1 (MQ=255)

                                           ttCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGATTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATgtc                                                                                                            <  2:1795867/150‑1 (MQ=255)

                                           ttCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  >  1:459152‑M2/1‑107 (MQ=255)

                                           ttCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  <  2:459152‑M2/112‑6 (MQ=255)

                                           ttCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATgtc                                                                                                            <  2:758183/150‑1 (MQ=255)

                                             cACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  >  2:1712148‑M2/1‑105 (MQ=255)

                                              aCCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  >  2:1510375‑M2/1‑104 (MQ=255)

                                              aCCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcggg                                                                                                                                                  <  1:1510375‑M2/109‑6 (MQ=255)

                                              aCCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATgtcgtc                                                                                                         >  1:1775693/1‑150 (MQ=255)

                                               ccGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCt                                                                                                        <  1:1930854/150‑1 (MQ=255)

                                                cGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAgg                                                                                                                                              <  2:1982510/111‑1 (MQ=255)

                                                cGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAgg                                                                                                                                              <  2:1982710/111‑1 (MQ=255)

                                                cGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAgg                                                                                                                                              >  1:1982710/1‑111 (MQ=255)

                                                cGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAgg                                                                                                                                              >  1:1982510/1‑111 (MQ=255)

                                                cGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCtt                                                                                                       <  1:2140907/150‑1 (MQ=255)

                                                 gCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCttt                                                                                                      >  1:1702423/1‑150 (MQ=255)

                                                  cccTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTc                                                                                                     >  2:1199088/1‑150 (MQ=255)

                                                         ggCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCgc                                                                                              >  2:2302375/1‑150 (MQ=255)

                                                            cGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCgccgg                                                                                           <  2:731243/150‑1 (MQ=255)

                                                                  ggCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGa                                                                                     <  1:116395/150‑1 (MQ=255)

                                                                            ccgATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCg                                                                                                                                   >  1:1526423/1‑94 (MQ=255)

                                                                               aTCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGCCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAg                                                                        <  2:1775693/150‑1 (MQ=255)

                                                                                tCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAgg                                                                       <  1:1926493/150‑1 (MQ=255)

                                                                                  cGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGct                                                                     <  2:1702423/150‑1 (MQ=255)

                                                                                   gACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAAc                                                                                                                                      >  1:307064/1‑84 (MQ=255)

                                                                                   gACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAAc                                                                                                                                      >  1:306734/1‑84 (MQ=255)

                                                                                   gACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAAc                                                                                                                                      <  2:307064/84‑1 (MQ=255)

                                                                                   gACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAAc                                                                                                                                      <  2:306734/84‑1 (MQ=255)

                                                                                   gACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGctc                                                                    >  1:1572734/1‑150 (MQ=255)

                                                                                   gACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGctc                                                                    <  2:1543723/150‑1 (MQ=255)

                                                                                        caccaGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCACGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAg                                                               >  2:443376/1‑150 (MQ=255)

                                                                                        caccaGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCa                                                                                                                         <  1:530066/92‑1 (MQ=255)

                                                                                        caccaGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCa                                                                                                                         >  2:530066/1‑92 (MQ=255)

                                                                                        caccaGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCACATGCAAGCGGGCAGGACGTAGACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAg                                                               >  1:1487883/1‑150 (MQ=255)

                                                                                                 cacGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGcgcgt                                                      >  1:219619/1‑150 (MQ=255)

                                                                                                 cacGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCAATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGTTCTGCAGCTTGcccgt                                                      >  1:707256/1‑150 (MQ=255)

                                                                                                     ccGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGAGCCATCAAGCGGGCAGGACGTATACCCGTGGGGCTCCAGGTGTTCCTGGTCGTCTTGCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGcgcgtcgcg                                                  >  2:2103141/1‑150 (MQ=255)

                                                                                                       gTGCCTGCGGTCACCGTTAGAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCATGGTGCTCCAGGTGTCCCATGTCGTCTTTAACTCAGCAGGCCCATATGCGTAACCGCAGGCTCTGCAGCTTGCGCGTCGCGtt                                                <  1:1994428/150‑1 (MQ=255)

                                                                                                       gTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGtt                                                <  1:1792263/150‑1 (MQ=255)

                                                                                                        tGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTa                                                                                                                                 >  2:1809770/1‑68 (MQ=255)

                                                                                                        tGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTa                                                                                                                                 <  1:1809770/68‑1 (MQ=255)

                                                                                                            tGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAg                                                                                                                        <  1:1350521/73‑1 (MQ=255)

                                                                                                            tGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAg                                                                                                                        >  2:1350521/1‑73 (MQ=255)

                                                                                                                   aCCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCttt                                                                                                      >  2:2021518/1‑84 (MQ=255)

                                                                                                                   aCCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGcaccac                                    >  1:806818/1‑150 (MQ=255)

                                                                                                                     cGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgggctttatcggtgaccgcagtcacggcgtggtgctggtggtgtcggatcggcggtaccgcctgcccggcctgcagggcggtgaagtggc                                                           >  2:1980389‑M2/1‑33 (MQ=255)

                                                                                                                     cGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgggctttatcggtgaccgcagtcacggcgtggtgctggtggtgtcggatcggcggtaccgcctgcccggcctgcagggcggtgaagtggc                                                           <  1:1980389‑M2/125‑93 (MQ=255)

                                                                                                                     cGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGcaccacca                                  >  2:1735124/1‑150 (MQ=255)

                                                                                                                      gATAAAGCCCGCCAACGCCTCTGCGCCTTCAAGCGGGCAGGACGTACCCCCTTGGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGcaccaccac                                 <  2:1771920/150‑1 (MQ=255)

                                                                                                                       aTAAAGCCCGCCAAGGCCTCGGCGCCTTCAAgcgggctttatcggtgaacgcagtcaaggcgtggtgctggtgtttacggatcggcggtaccgcctgcccggcctgcagggcggtgaagtggccttgtacaccgacgaaggcgaccgggg                                <  1:886773‑M2/150‑120 (MQ=255)

                                                                                                                       aTAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCAccacg                                >  1:949971/1‑150 (MQ=255)

                                                                                                                        ttgaaggcGCCGAGGCCTTGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCAccacgc                               >  2:1648245/8‑150 (MQ=255)

                                                                                                                         aaaGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCGGGACGTAAACCCGTAGGGCTGCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCAccacgcc                              >  2:455564/1‑150 (MQ=255)

                                                                                                                          aaGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCAccacgcca                             >  1:755923/1‑150 (MQ=255)

                                                                                                                           aGCCCGCCAAGGCCTCGGCGCCTTG‑cgggctttatcggtgaccgcagtcacggcgtggtgctggtggtgtcggatcggcggtaccgcctgcccggcctgcagggcggtgaagtggccttgtacaccgacgaaggcgaccgggttgtgct                            <  2:1468121‑M2/150‑125 (MQ=255)

                                                                                                                              ccGCCAAGGCCTCGGCGCCTTAAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACggg                         >  1:1872106/1‑150 (MQ=255)

                                                                                                                               cGCCAAGGCCTCGGCGCCTTG‑cgggctttatcggtgaccgcagtcacggcgtggtgctggtggtgtcggatcggcggtaccgcctgcccggcctgcagggcggtgaagtggccttgtacaccgacgaaggcgaccgggttgtgctcaag                        >  1:1468121‑M2/1‑22 (MQ=255)

                                                                                                                                gCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCa                                                                         >  2:1933428/1‑100 (MQ=255)

                                                                                                                                gCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCa                                                                         <  1:1933428/100‑1 (MQ=255)

                                                                                                                                gCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGcc                       >  1:2427987/1‑150 (MQ=255)

                                                                                                                                 ccAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCgcc                                                                                             <  1:1032828/79‑1 (MQ=255)

                                                                                                                                 ccAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCgcc                                                                                             >  2:1032828/1‑79 (MQ=255)

                                                                                                                                    aGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAg                                                                                                                        <  2:2376264/49‑1 (MQ=255)

                                                                                                                                    aGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAg                                                                                                                        >  1:2376264/1‑49 (MQ=255)

                                                                                                                                       ccTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATAcgc                <  1:343366/150‑1 (MQ=255)

                                                                                                                                             cgcCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCa          <  2:545529/150‑1 (MQ=255)

                                                                                                                                              gcCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATAcgccc              >  2:213441/1‑145 (MQ=255)

                                                                                                                                              gcCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATAcgccc              <  1:213441/145‑1 (MQ=255)

                                                                                                                                               ccTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCAtt        <  2:1777752/150‑1 (MQ=255)

                                                                                                                                                cTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTg       <  2:1572734/150‑1 (MQ=255)

                                                                                                                                                cTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTg       <  2:806818/150‑1 (MQ=255)

                                                                                                                                                 ttCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTgg      <  2:2149126/150‑1 (MQ=255)

                                                                                                                                                 ttCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTgg      >  1:1962317/1‑150 (MQ=255)

                                                                                                                                                   cAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTGGGt    <  2:1005258/150‑1 (MQ=255)

                                                                                                                                                    aaGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTGGGtt   >  1:1037158/1‑150 (MQ=255)

                                                                                                                                                     aGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTGGGttt  <  2:2427987/150‑1 (MQ=255)

GCTTGAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCCAAGGCCTCGGCGCCTTCAAGCGGGCAGGACGTAAACCCGTAGGGCTCCAGGTGTTCCATGTCGTCTTTCACTTCGCCGGCCGTGATGCGTAACTGCAGGCTCTGCAGCTTGCGCGTCGCGTTGGCCAGCACCACCACGCCACGGGCCAATACGCCCGCCATTGGGTTT  >  NC_002947/4386161‑4386459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.