New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5817927 =105 (1.130)5 (0.060) 5/236 NT 5.1% coding (83/1011 nt) pilT twitching motility protein
?NC_002947 5817979 = 88 (1.000)coding (31/1011 nt) pilT twitching motility protein

Only 100 of 109 total aligned reads displayed.

TCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGCAGT  >  NC_002947/5817831‑5818127
                                                                                                                                                    |                                                                                                                                                    
tCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAAc                                                                                                                                                     >  2:102417/1‑150 (MQ=255)
  cAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAg                                                                                                                                                   >  1:2234078/1‑150 (MQ=255)
    gtggacatggatcgatgccggcagctgtggggtctgcggcattctacctgcttgaaggcctttggggagtcttatggatgtgaccgacctgtTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggt                                                                                                                                                 >  2:1272338‑M1/93‑150 (MQ=255)
    gCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggt                                                                                                                                                 >  1:867401/1‑150 (MQ=255)
    gCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggt                                                                                                                                                 >  2:318541/1‑150 (MQ=255)
     cACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggtc                                                                                                                                                <  1:102417/150‑1 (MQ=255)
        gCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTTCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggtcggt                                                                                                                                             >  2:1530705/1‑150 (MQ=255)
          tGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTca                                                                                                                                           >  1:2164522/1‑150 (MQ=255)
          tGGCCATGCCCTCGATCAAGGCACCCTGGCCCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTca                                                                                                                                           >  2:927388/1‑150 (MQ=255)
            gCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCTCCGCATCCACAGCTCGGGCCAACAGGTCGGTcaca                                                                                                                                         <  2:1277450/150‑1 (MQ=255)
             ccATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACAt                                                                                                                                        <  2:1324088/150‑1 (MQ=255)
                   ccTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATaa                                                                                                                                  >  1:2013614/1‑150 (MQ=255)
                    cTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAg                                                                                                                                 >  2:1541787/1‑150 (MQ=255)
                    cTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAg                                                                                                                                 >  2:1890027/1‑150 (MQ=255)
                    cTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAg                                                                                                                                 >  2:4632/1‑150 (MQ=255)
                    cTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAg                                                                                                                                 >  2:1005302/1‑150 (MQ=255)
                     tCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCAAACTAGGTTCTGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGa                                                                                                                                >  2:684110/1‑150 (MQ=255)
                       gATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggtcggt                                                                                                                                             >  2:1036420/1‑135 (MQ=255)
                       gATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAggtcggt                                                                                                                                             <  1:1036420/135‑1 (MQ=255)
                         tCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTcc                                                                                                                            <  1:2096496/150‑1 (MQ=255)
                             ggCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCaa                                                                                                                        >  1:2189547/1‑150 (MQ=255)
                                aCCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAgg                                                                                                                     >  1:2263921/1‑150 (MQ=255)
                                  ccTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGcc                                                                                                                   <  1:1541787/150‑1 (MQ=255)
                                     ggCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTGGGTCCAACATGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTc                                                                                                                <  1:46703/150‑1 (MQ=255)
                                        tCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAg                                                                                                             >  1:1071963/1‑150 (MQ=255)
                                          aaCGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCa                                                                                                           <  1:713025/150‑1 (MQ=255)
                                            cggcggCAAGCCCTTACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCCCAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAgg                                                                                                         <  1:426241/150‑1 (MQ=255)
                                            cggcggCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAgg                                                                                                         <  1:1890027/150‑1 (MQ=255)
                                            cggcggCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAgg                                                                                                         <  1:1152573/150‑1 (MQ=255)
                                               cggcAAGCCCATCCGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTTATGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCaactaa                                                                                                      <  2:223762/150‑6 (MQ=255)
                                                   aaGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATg                                                                                                  <  2:2173425/150‑1 (MQ=255)
                                                     gCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCCCATCCATCAGACACCCCAAAGGCCTTCAAGCAGGTAGAATGcc                                                                                                <  1:2263124/150‑1 (MQ=255)
                                                     gCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGcc                                                                                                <  1:815520/150‑1 (MQ=255)
                                                        cATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCa                                                                                             >  1:2359604/1‑150 (MQ=255)
                                                          tACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGa                                                                                           <  1:1005302/150‑1 (MQ=255)
                                                               tGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCca                                                                                      <  1:2175321/150‑1 (MQ=255)
                                                               tGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCca                                                                                      <  1:1936157/150‑1 (MQ=255)
                                                                    cTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCt                                                                                 <  2:218093/150‑1 (MQ=255)
                                                                     tCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTg                                                                                >  2:1846537/1‑150 (MQ=255)
                                                                      cGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGc                                                                               <  2:568200/150‑1 (MQ=255)
                                                                       gCCATCCAGGCGCAGCCTCGGAATCTGCACAGTAGCCAGGTATAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGGCACATCCATAAGACTCCACAAAGGCCTTCAAGCAGGGACAATGCCGCAGACCGCACAGCTGcc                                                                              >  2:1207054/1‑150 (MQ=255)
                                                                       gCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGACTGCCGCAGACCCCACAGCTGcc                                                                              <  1:1389064/150‑1 (MQ=255)
                                                                       gCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGcc                                                                              >  1:65997/1‑150 (MQ=255)
                                                                          aTCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGc                                                                           >  1:181446/1‑150 (MQ=255)
                                                                          aTCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGc                                                                           >  1:181705/1‑150 (MQ=255)
                                                                            ccAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCAt                                                                         <  2:2013614/150‑1 (MQ=255)
                                                                                  gcagcaTCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAgg                                                                                                         <  2:772041/112‑1 (MQ=255)
                                                                                  gcagcaTCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAgg                                                                                                         >  1:772041/1‑112 (MQ=255)
                                                                                  gcagcaTCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATcc                                                                   <  1:1649834/150‑1 (MQ=255)
                                                                                    agcaTCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCAt                                                                 <  2:559555/150‑1 (MQ=255)
                                                                                    agcaTCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCAt                                                                 >  2:206010/1‑150 (MQ=255)
                                                                                        tCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTcc                                                             >  1:1414788/1‑150 (MQ=255)
                                                                                          ggAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAc                                                           <  2:2263921/150‑1 (MQ=255)
                                                                                          ggAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAc                                                           <  1:923827/150‑1 (MQ=255)
                                                                                          acctgttggcccgagctgtggatgcgggggcttcagacctgcacctggcgacgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAc                                                           >  2:1272338‑M2/59‑150 (MQ=255)
                                                                                           gAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAcc                                                          >  2:1812355/1‑150 (MQ=255)
                                                                                              tCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTa                                                       >  2:1387309/1‑150 (MQ=255)
                                                                                                  gcccgagctgtggatgcgggggcttcagacctgcacctggcgacgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAg                                                   >  1:2284279‑M2/51‑150 (MQ=255)
                                                                                                  GCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGNCAACAGGTCGGTCACATCCATAATACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAg                                                   <  1:318761‑M1/150‑1 (MQ=255)
                                                                                                   CCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGa                                                  >  1:1387309‑M1/1‑150 (MQ=255)
                                                                                                   CCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCAAAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGa                                                  <  1:1830544‑M1/150‑1 (MQ=255)
                                                                                                    ccgagctgtggatgcgggggcttcagacctgcacctggcgacgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAc                                                           <  2:175114‑M2/92‑1 (MQ=255)
                                                                                                    ccgagctgtggatgcgggggcttcagacctgcacctggcgacgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCAc                                                           >  1:175114‑M2/49‑140 (MQ=255)
                                                                                                    CCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCTATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCca                                                                                      <  1:558405‑M1/113‑1 (MQ=255)
                                                                                                    CCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCTATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCca                                                                                      >  2:558405‑M1/1‑113 (MQ=255)
                                                                                                      GTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACaa                                               >  1:1213930‑M1/1‑150 (MQ=255)
                                                                                                       tCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAAc                                              <  1:206010/150‑1 (MQ=255)
                                                                                                        cGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAAcc                                             <  1:344598/150‑1 (MQ=255)
                                                                                                           cAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGt                                                               <  2:1992832/129‑1 (MQ=255)
                                                                                                           cAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGt                                                               >  1:1992832/1‑129 (MQ=255)
                                                                                                             ggTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTcc                                        <  1:318541/150‑1 (MQ=255)
                                                                                                             ggTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCCGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTcc                                        <  1:392121/150‑1 (MQ=255)
                                                                                                                 cAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCgg                                                                            <  2:933635/110‑1 (MQ=255)
                                                                                                                 cAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCgg                                                                            >  1:933635/1‑110 (MQ=255)
                                                                                                                 cAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGa                                                  <  2:738472/136‑1 (MQ=255)
                                                                                                                 cAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGa                                                  >  1:738472/1‑136 (MQ=255)
                                                                                                                  aGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGAt                                   >  1:2164446/1‑150 (MQ=255)
                                                                                                                      cTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTcc                               >  1:1372526/1‑150 (MQ=255)
                                                                                                                       tGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACaa                                               <  1:1323746/133‑1 (MQ=255)
                                                                                                                       tGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAAACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACaa                                               >  2:1323746/1‑133 (MQ=255)
                                                                                                                        gAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCa                                                                  >  2:756484/1‑113 (MQ=255)
                                                                                                                        gAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCa                                                                  <  1:756484/113‑1 (MQ=255)
                                                                                                                        cttcagacctgcacctggcgacgggccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGc                             <  2:2284279‑M2/122‑1 (MQ=255)
                                                                                                                         aaGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGcc                            <  2:1531789/150‑1 (MQ=255)
                                                                                                                           gCCCCCGCATCCACAGCTCGGGCCAACAGGGCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCAGGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCg                          >  2:1406142/1‑150 (MQ=255)
                                                                                                                               ccGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAAc                                              >  2:2446831/1‑126 (MQ=255)
                                                                                                                               ccGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAAc                                              <  1:2446831/126‑1 (MQ=255)
                                                                                                                               ccGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATc                      >  1:607202/1‑150 (MQ=255)
                                                                                                                               ccGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATc                      >  1:1996781/1‑150 (MQ=255)
                                                                                                                                   aTCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCa                  <  2:2380554/150‑1 (MQ=255)
                                                                                                                                      cacaGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCTCATAGGGCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGtg               >  1:416068/1‑150 (MQ=255)
                                                                                                                                       acaGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCgg                                                                            <  2:1628501/88‑1 (MQ=255)
                                                                                                                                       acaGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCgg                                                                            >  1:1628501/1‑88 (MQ=255)
                                                                                                                                       acaGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGtgc              >  1:818966/1‑150 (MQ=255)
                                                                                                                                       acaGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGtgc              >  2:4550/1‑150 (MQ=255)
                                                                                                                                          gCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGtgctgc           <  1:1097269/150‑1 (MQ=255)
                                                                                                                                           cTCGGGCCAACAGGTCGGTCACATCCCTGGTGCTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGcc          >  1:62221/1‑150 (MQ=255)
                                                                                                                                           cTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGcc          <  2:2427481/150‑1 (MQ=255)
                                                                                                                                                gccaACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGc     <  2:1414788‑M2/146‑1 (MQ=255)
                                                                                                                                                   aACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGCAGt  >  1:391650‑M2/2‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCGCAGCATCGGAATCTGGCCCGTCGCCAGGTGCAGGTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTTCCGCCCGTATCGCCAGTGCTGCCCAGGCAGT  >  NC_002947/5817831‑5818127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.