New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6050814 =104 (1.110)5 (0.060) 5/238 NT 5.2% coding (1620/2109 nt) spoT bifunctional (p)ppGpp synthase/hydrolase
?NC_002947 6050855 = 84 (0.950)coding (1661/2109 nt) spoT bifunctional (p)ppGpp synthase/hydrolase

Only 100 of 109 total aligned reads displayed.

TCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGT  >  NC_002947/6050708‑6051003
                                                                                                                                                        |                                                                                                                                                     
tCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑g                                                                                                                                                    >  1:2229104/1‑150 (MQ=255)
  ggccgacaggtggccgacaatcgggtcacccgggatcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggccttctgG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑Gaa                                                                                                                                                  >  2:208595‑M1/105‑150 (MQ=255)
  ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑Gaa                                                                                                                                                  >  2:1793046/1‑150 (MQ=255)
  ccccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑Gaa                                                                                                                                                  >  2:2233704/1‑150 (MQ=255)
   cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAg                                                                                                                                                 >  2:958881/1‑150 (MQ=255)
   cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAg                                                                                                                                                 <  1:1664959/150‑1 (MQ=255)
   cccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAg                                                                                                                                                 >  2:723929/1‑150 (MQ=255)
    ccAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAgg                                                                                                                                                >  1:870377/1‑150 (MQ=255)
        gAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCAGCTCAACGGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCa                                                                                                                                            >  2:2300836/1‑150 (MQ=255)
         aaCGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCAc                                                                                                                                           >  1:1552571/1‑150 (MQ=255)
            gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTgg                                                                                                                                        <  2:580238/150‑1 (MQ=255)
            gCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑AGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTgg                                                                                                                                        <  1:1189009/150‑1 (MQ=255)
               tCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATGGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGa                                                                                                                                     <  1:723929/150‑1 (MQ=255)
                gacaatcgggtcacccgggatcggcgtgcagcacttggcgtagctgagcaccaggccttcggtgccgcggatcgccagtgggcctacgtgGTCGCGCGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCNCTg                                                                                                                                         >  2:1509562‑M1/91‑150 (MQ=255)
                ccAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGAt                                                                                                                                    >  2:2247689/1‑150 (MQ=255)
                 cAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATc                                                                                                                                   >  1:1119581/1‑150 (MQ=255)
                  aGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATcc                                                                                                                                  >  1:1128621/1‑150 (MQ=255)
                    tCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCcgc                                                                                                                                >  2:1060657/1‑150 (MQ=255)
                      tATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCgg                                                                                                                              >  2:1706685/1‑150 (MQ=255)
                       aTTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGc                                                                                                                             >  1:387168/1‑150 (MQ=255)
                         tctcGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCAc                                                                                                                           <  2:2424432/150‑1 (MQ=255)
                                  gTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCt                                                                                                                  <  1:924606/150‑1 (MQ=255)
                                   tACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTg                                                                                                                 >  2:957430/1‑150 (MQ=255)
                                    aCCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTgg                                                                                                                <  1:482744/150‑1 (MQ=255)
                                    aCCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTgg                                                                                                                <  1:2247689/150‑1 (MQ=255)
                                         cTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTc                                                                                                           >  2:763004/1‑150 (MQ=255)
                                          tGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCa                                                                                                          <  1:1063250/150‑1 (MQ=255)
                                                 cATAGAAGGCCTGCTCGAAGACATCGGCCTGGGCATCTGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGc                                                                                                   <  2:1145542/150‑1 (MQ=255)
                                                  aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCAc                                                                                                                           >  2:711277/1‑125 (MQ=255)
                                                  aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCAc                                                                                                                           <  1:711277/125‑1 (MQ=255)
                                                  aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCt                                                                                                            >  1:2212865/1‑140 (MQ=255)
                                                  aTAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGcc                                                                                                  >  1:385808/1‑150 (MQ=255)
                                                    agaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCaa                                                                                                >  1:2165154/1‑150 (MQ=255)
                                                     gaagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAg                                                                                               <  1:1328884/150‑1 (MQ=255)
                                                      aagaCCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGt                                                                                              >  2:2272918/1‑150 (MQ=255)
                                                                 gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGa                                                                                                                                     >  1:137157/1‑100 (MQ=255)
                                                                 gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGa                                                                                                                                     <  2:137157/100‑1 (MQ=255)
                                                                 gAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCg                                                                                   >  1:507750/1‑150 (MQ=255)
                                                                   aGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCCCCTAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGAt                                                                                 <  1:958881/150‑1 (MQ=255)
                                                                    gACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTgg                                                                                                                <  2:2438938/118‑1 (MQ=255)
                                                                       aTCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCg                                                                             >  1:1246560/1‑150 (MQ=255)
                                                                       aTCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTACGCTACGCCAAGTGCTGCACGCCGATCCCg                                                                             >  1:1818071/1‑150 (MQ=255)
                                                                        tCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCgg                                                                            <  1:769581/150‑1 (MQ=255)
                                                                        tCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCgg                                                                            >  2:645893/1‑150 (MQ=255)
                                                                        tCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCgg                                                                            <  2:2165154/150‑1 (MQ=255)
                                                                              tGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGAcc                                                                      <  2:387168/150‑1 (MQ=255)
                                                                               gtgCAACCGCATGGACTCCGTGGTCGCG‑‑‑‑‑CGGTGGCCGCTGGCGGCCGAACGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGAccc                                                                     <  2:1841354/148‑1 (MQ=255)
                                                                                 gCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGGTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCGAGTGCTGCACGCCGATCCCGGGTGACCCGa                                                                   >  2:1277976/1‑150 (MQ=255)
                                                                                  cAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAt                                                                  <  2:1119581/150‑1 (MQ=255)
                                                                                  cAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAt                                                                  <  1:363420/150‑1 (MQ=255)
                                                                                   aaCCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAtt                                                                 <  1:991807/150‑1 (MQ=255)
                                                                                   aaCCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGAtt                                                                 >  2:2266115/1‑150 (MQ=255)
                                                                                     ccGNATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt                                                               >  2:1498558/1‑150 (MQ=255)
                                                                                     ccGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt                                                               <  1:986771/150‑1 (MQ=255)
                                                                                     ccGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGt                                                               >  1:2328368/1‑150 (MQ=255)
                                                                                      cGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAg                                                                                                                                                 <  1:2005378/67‑1 (MQ=255)
                                                                                      cGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAg                                                                                                                                                 >  2:2005378/1‑67 (MQ=255)
                                                                                      cGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTc                                                              <  2:1552571/150‑1 (MQ=255)
                                                                                       gCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCg                                                             <  2:2118592/150‑1 (MQ=255)
                                                                                            cagngggccttctggcgccggcagctgttcgccttcggccgacagcaggcggcgcgcgacCACGTAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTc                                                              >  2:1509562‑M2/61‑150 (MQ=255)
                                                                                              cTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCa                                                                                                                                                      <  2:1365584/55‑1 (MQ=255)
                                                                                              cTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCa                                                                                                                                                      >  1:1365584/1‑55 (MQ=255)
                                                                                                aCGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGt                                                    <  1:1793046/150‑1 (MQ=255)
                                                                                                aCGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGt                                                    <  1:2233704/150‑1 (MQ=255)
                                                                                                 cGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTc                                                   >  2:507736/1‑150 (MQ=255)
                                                                                                    ggTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggc                                                <  1:2266115/150‑1 (MQ=255)
                                                                                                      tCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggccg                                              <  2:2328368/150‑1 (MQ=255)
                                                                                                       cgcg‑‑‑‑‑cgCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggccgg                                             >  1:1824098/1‑150 (MQ=255)
                                                                                                          ttctggcgccggcagctgttcgccttcggccgacagcaggcggcgcCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTcggcc                                               >  2:208595‑M2/47‑150 (MQ=255)
                                                                                                          G‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCaa                                          <  1:335166‑M1/150‑1 (MQ=255)
                                                                                                                CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAg                                         >  1:1060657‑M1/1‑150 (MQ=255)
                                                                                                                 cagctgttcgccttcggccgacagcaggcggcgcgcgacCACGTAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAg                                         <  1:1509562‑M2/111‑1 (MQ=255)
                                                                                                                 GCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGtgctg                                                                                          >  1:1682325‑M1/1‑100 (MQ=255)
                                                                                                                 GCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGtgctg                                                                                          <  2:1682325‑M1/100‑1 (MQ=255)
                                                                                                                 GCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAgg                                        >  1:763004‑M1/1‑150 (MQ=255)
                                                                                                                  ccggcagctgttcgccttcggccgacagcaggcggcgcCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGa                                                                                  <  1:1700667‑M2/69‑1 (MQ=255)
                                                                                                                  ccggcagctgttcgccttcggccgacagcaggcggcgcCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGa                                                                                  >  2:1700667‑M2/39‑107 (MQ=255)
                                                                                                                   CGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGc                                      <  1:2212437‑M1/150‑1 (MQ=255)
                                                                                                                   CGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGc                                      <  1:1286104‑M1/150‑1 (MQ=255)
                                                                                                                   CGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGc                                      >  2:507750‑M1/1‑150 (MQ=255)
                                                                                                                      ctgctgTCGGCTGAAGGCGAACAGCGGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATg                                   <  2:616639/150‑1 (MQ=255)
                                                                                                                         ctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTc                                >  2:1138819/1‑150 (MQ=255)
                                                                                                                         ctgTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGCCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTc                                <  1:1706685/150‑1 (MQ=255)
                                                                                                                            tCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCGGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTg                             <  1:251900/150‑1 (MQ=255)
                                                                                                                              ggCNGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAATGGCATGGTCGTGCa                           >  2:1501785/1‑150 (MQ=255)
                                                                                                                              ggCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCCGGTGACCCGACTGTCGGCCACCTGACGGCCTGCAAGGGCATGGTCGTGcc                           >  2:515819/1‑149 (MQ=255)
                                                                                                                               gCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCAGCTGTCGGCCGGCAACGGCATGGTCGTGCAc                          <  1:2300836/150‑1 (MQ=255)
                                                                                                                                 cGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCt                        >  2:1368795/1‑150 (MQ=255)
                                                                                                                                  gAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTg                       <  1:507736/150‑1 (MQ=255)
                                                                                                                                    aGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGga                     <  2:1818071/150‑1 (MQ=255)
                                                                                                                                    aGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGACATGGTCGTGCACCTGga                     <  2:335166/150‑1 (MQ=255)
                                                                                                                                    aGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGAACCGAATTCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGga                     >  1:1879234/1‑150 (MQ=255)
                                                                                                                                        gAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAAc                 >  1:506832/1‑150 (MQ=255)
                                                                                                                                        gAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGATGCACGCCGATCCCGTGTGACCCGATTGTCTGCCACCTGTCGGCCGTCATGGGGATGGTCGTGCACCGGGACAAc                 >  2:1084647/1‑150 (MQ=255)
                                                                                                                                         aaCAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACt                >  1:1517341/1‑150 (MQ=255)
                                                                                                                                            aGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCTGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGcc             <  1:2272918/150‑1 (MQ=255)
                                                                                                                                            aGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCAGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGcc             >  2:332750/1‑150 (MQ=255)
                                                                                                                                                 ccGGCGCCA‑GAAGGCCCACTGGCGATCCGCGTCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAAc        <  1:840173/150‑1 (MQ=255)
                                                                                                                                                     cgcCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCa    <  1:1180481‑M2/147‑1 (MQ=255)
                                                                                                                                                       cCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGt  <  1:1287949‑M2/149‑1 (MQ=255)
                                                                                                                                                        |                                                                                                                                                     
TCCCCCAGGAACGCATCCAGTCTATTCTCGCCGAGTACCGCCTGGAGCTCATAGAAGACCTGCTCGAAGACATCGGCCTGGGCAACCGCATGGCCTACGTGGTCGCG‑‑‑‑‑CGCCGCCTGCTGTCGGCCGAAGGCGAACAGCTGCCGGCGCCA‑GAAGGCCCACTGGCGATCCGCGGCACCGAAGGCCTGGTGCTCAGCTACGCCAAGTGCTGCACGCCGATCCCGGGTGACCCGATTGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTCGTGCACCTGGAGAACTGCCGCAACATCAGT  >  NC_002947/6050708‑6051003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.