BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_002947	1,844,516	Δ70 bp	coding (251‑320/2754 nt)	gacS ←	sensor protein GacS

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	1844516	1844585	70	291 [0]	[0] 293	gacS	sensor protein GacS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1844515	0 (0.000)	286 (1.280)	134/284	0.1	100%	coding (321/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	1844586 =	0 (0.000)	286 (1.280)	134/284	0.1	100%	coding (250/2754 nt)	gacS	sensor protein GacS

Only 100 of 291 total aligned reads displayed.

AGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGCGCGAGCCGGGCCATGGCGGG  >  NC_002947/1844366‑1844661

aGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTG                                                                                                                                                    >  2:3012890‑M1/1‑150 (MQ=255)

  cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcg                                                                                                                                                  >  2:4110927‑M1/1‑148 (MQ=255)

  cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcg                                                                                                                                                  <  2:1158777‑M1/150‑3 (MQ=255)

   tCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgc                                                                                                                                                 <  2:3257248‑M1/150‑4 (MQ=255)

     gATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgc                                                                                                                                               >  2:3672041‑M1/1‑145 (MQ=255)

     gATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgc                                                                                                                                               >  1:799430‑M1/1‑145 (MQ=255)

         tctACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacat                                                                                                                                           >  2:2886090‑M1/1‑141 (MQ=255)

         tctACCCAGCCCAGCAGGCGCTAGGATTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTAGGGTGCCGGTACCGCCGCTGcgcgcacat                                                                                                                                           >  2:3840472‑M1/1‑141 (MQ=255)

           tACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcg                                                                                                                                         >  2:2929973‑M1/1‑139 (MQ=255)

              ccagcccagcAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcc                                                                                                                                      >  2:3093805‑M1/1‑136 (MQ=255)

              ccagcacagcAGGCGATCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGTCCGAAAACTGGAATCAGGTAGCGGGTGGAGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcc                                                                                                                                      >  2:3747409‑M1/1‑136 (MQ=255)

                 gcccagcAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgc                                                                                                                                   >  2:4513170‑M1/1‑133 (MQ=255)

                     agcagGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctcca                                                                                                                               <  2:1556356‑M1/150‑22 (MQ=255)

                       cagGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagg                                                                                                                             <  2:943162‑M1/150‑24 (MQ=255)

                       cagGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagg                                                                                                                             <  1:405557‑M1/150‑24 (MQ=255)

                            gcTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttg                                                                                                                        >  1:5031184‑M1/1‑122 (MQ=255)

                            gcTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcccgctccagggtttg                                                                                                                        >  1:2492880‑M1/1‑122 (MQ=255)

                              tCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtg                                                                                                                      >  1:3670583‑M1/1‑120 (MQ=255)

                               cGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgc                                                                                                                     <  1:3158100‑M1/150‑32 (MQ=255)

                                 gCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcgg                                                                                                                   <  2:522293‑M1/150‑34 (MQ=255)

                                   ttCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggca                                                                                                                 >  2:3858888‑M1/1‑115 (MQ=255)

                                    tCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaa                                                                                                                <  1:5051043‑M1/150‑37 (MQ=255)

                                     cggccggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcgacaat                                                                                                               >  2:2309571‑M1/1‑113 (MQ=255)

                                       gccggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTTGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtg                                                                                                                      >  2:688034‑M1/1‑111 (MQ=255)

                                       gccggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgcgcggcaattc                                                                                                             >  1:4237989‑M1/1‑111 (MQ=255)

                                          ggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctct                                                                                                          <  1:2775071‑M1/150‑43 (MQ=255)

                                           gcACGGCGTCGGTGGTCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctc                                                                                                         <  2:1527372‑M1/150‑44 (MQ=255)

                                                     ggTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgca                                                                                               <  2:4969146‑M1/150‑54 (MQ=255)

                                                           cAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcg                                                                                         >  1:4822710‑M1/1‑91 (MQ=255)

                                                            aGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcga                                                                                        <  1:4110927‑M1/150‑61 (MQ=255)

                                                              gTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagc                                                                                      >  1:1083912‑M1/1‑88 (MQ=255)

                                                                cgcgGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcccgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccg                                                                                    <  2:2098062‑M1/150‑65 (MQ=255)

                                                                 gcgGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgg                                                                                   <  2:4047325‑M1/150‑66 (MQ=255)

                                                                   ggtggtGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGCGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggc                                                                                 <  1:4451120‑M1/150‑68 (MQ=255)

                                                                     tggtggCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggcca                                                                               >  1:681367‑M1/1‑81 (MQ=255)

                                                                       gtggCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatccgccagctccagggtttgtgaggcaattctctccagttgcgcaggcgcgagccgggccatg                                                                             >  1:4741241‑M1/1‑79 (MQ=255)

                                                                        tggCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatgg                                                                            >  2:87105‑M1/1‑78 (MQ=255)

                                                                          gCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcg                                                                          >  1:2869728‑M1/1‑76 (MQ=255)

                                                                           ccGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctcccgttgcgcaggcgcgagccgggccatggcgg                                                                         >  2:3561281‑M1/1‑75 (MQ=255)

                                                                           ccGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgg                                                                         <  1:2133684‑M1/150‑76 (MQ=255)

                                                                            cGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcggg                                                                        >  2:3199196‑M1/1‑74 (MQ=255)

                                                                            cGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcggg                                                                        >  2:3890207‑M1/1‑74 (MQ=255)

                                                                            cGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcgg                                                                                                                   <  2:339532‑M1/107‑34 (MQ=255)

                                                                             gAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggt                                                                       <  1:3062042‑M1/150‑78 (MQ=255)

                                                                              aaaaCTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtg                                                                      <  2:510348‑M1/150‑79 (MQ=255)

                                                                                aaCTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcg                                                                    <  2:2601780‑M1/150‑81 (MQ=255)

                                                                                     gCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccag                                                               <  1:236928‑M1/150‑86 (MQ=255)

                                                                                     gCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccag                                                               <  2:136904‑M1/150‑86 (MQ=255)

                                                                                       aTCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggg                                                             >  1:626326‑M1/1‑63 (MQ=255)

                                                                                           ggTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgc                                                         >  1:415680‑M1/1‑59 (MQ=255)

                                                                                           ggTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaagtctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgc                                                         >  1:3297564‑M1/1‑59 (MQ=255)

                                                                                            gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgcc                                                        <  1:949385‑M1/150‑93 (MQ=255)

                                                                                            gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgcc                                                        >  1:3549613‑M1/1‑58 (MQ=255)

                                                                                            gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagcc                                                                                     >  1:1473709‑M1/1‑58 (MQ=255)

                                                                                            gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagcc                                                                                     <  2:1473709‑M1/121‑64 (MQ=255)

                                                                                             tAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgtgccgggccatggcgggtgcggccaggggcgcca                                                       >  2:4769935‑M1/1‑57 (MQ=255)

                                                                                             tAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgcca                                                       <  2:786556‑M1/150‑94 (MQ=255)

                                                                                             tAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgcca                                                       <  1:12104‑M1/150‑94 (MQ=255)

                                                                                             tAGCGGGTGGCGTCGTTGCCACTGCGCCGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgcca                                                       <  2:1950971‑M1/150‑94 (MQ=255)

                                                                                                 gggTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcacttctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgcccgttg                                                   >  2:1748573‑M1/1‑53 (MQ=255)

                                                                                                   gTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgtt                                                 <  1:3940504‑M1/150‑100 (MQ=255)

                                                                                                     ggCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcg                                               <  1:2183484‑M1/150‑102 (MQ=255)

                                                                                                      gCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcgg                                              <  2:2836513‑M1/150‑103 (MQ=255)

                                                                                                       cgtcgtTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggc                                             <  1:2190571‑M1/150‑104 (MQ=255)

                                                                                                          cgtTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgat                                          <  2:1027141‑M1/150‑107 (MQ=255)

                                                                                                           gtTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatc                                         <  2:4178746‑M1/150‑108 (MQ=255)

                                                                                                               ccACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcacttctctccagttgcgcaggcgcgagccgggccatggcgggtgcggcccggggcgccagttgttcggcgatcatct                                     >  2:4547338‑M1/1‑39 (MQ=255)

                                                                                                               ccACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatct                                     <  1:3210973‑M1/150‑112 (MQ=255)

                                                                                                                cACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatctt                                    >  1:1133520‑M1/1‑38 (MQ=255)

                                                                                                                 aCTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttg                                   <  1:4547830‑M1/150‑114 (MQ=255)

                                                                                                                   tGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgcc                                 <  1:3407635‑M1/150‑116 (MQ=255)

                                                                                                                   tGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgcc                                 >  2:3136892‑M1/1‑35 (MQ=255)

                                                                                                                   tGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgcc                                 <  1:855297‑M1/150‑116 (MQ=255)

                                                                                                                   tGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgcc                                 >  1:3393123‑M1/1‑35 (MQ=255)

                                                                                                                      gcTGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcg                              >  1:207613‑M1/1‑32 (MQ=255)

                                                                                                                        tGCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgct                            >  1:1995243‑M1/1‑30 (MQ=255)

                                                                                                                         gCAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctg                           <  2:333853‑M1/150‑122 (MQ=255)

                                                                                                                          cAGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgc                          >  1:1054017‑M1/1‑28 (MQ=255)

                                                                                                                           aGGAGTTGGGTGCCGGTACCGCCGCTGcgcgcatatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgca                         <  1:1737148‑M1/150‑124 (MQ=255)

                                                                                                                             gAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagc                       >  2:649803‑M1/1‑25 (MQ=255)

                                                                                                                             gAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagc                       <  1:1968639‑M1/150‑126 (MQ=255)

                                                                                                                             gAGTTGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagc                       >  1:1868985‑M1/1‑25 (MQ=255)

                                                                                                                                ttGGGTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcacttctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagc                    <  2:241915‑M1/150‑129 (MQ=255)

                                                                                                                                   ggTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggctattctctcgagttgcgcaggcgcgagccgggccatggcgggtgcggcctggggcgccagttgttcggcgatcatcttgccgcgctgcagcagcttg                 <  1:3840472‑M1/150‑132 (MQ=255)

                                                                                                                                   ggTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgg                 <  2:2042637‑M1/150‑132 (MQ=255)

                                                                                                                                   ggTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgg                 <  1:3020634‑M1/150‑132 (MQ=255)

                                                                                                                                   ggTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgg                 <  2:4348986‑M1/150‑132 (MQ=255)

                                                                                                                                   ggTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgg                 <  2:3484331‑M1/150‑132 (MQ=255)

                                                                                                                                   ggTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgcgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgg                 <  2:4237989‑M1/150‑132 (MQ=255)

                                                                                                                                    gTGCCGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctggg                >  2:3869813‑M1/1‑18 (MQ=255)

                                                                                                                                       ccGGTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgc             <  1:1317258‑M1/150‑136 (MQ=255)

                                                                                                                                        cGGTACCGCCGCTGcgcgcacctcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcg            <  2:1260822‑M1/150‑137 (MQ=255)

                                                                                                                                          gTACCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgca          <  1:3743083‑M1/150‑139 (MQ=255)

                                                                                                                                            aCCGCCGCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgcagg        <  1:4513170‑M1/150‑141 (MQ=255)

                                                                                                                                             ccgccgCTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgcaggt       <  2:4705689‑M1/150‑142 (MQ=255)

                                                                                                                                              cgccgcTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgcaggtc      >  1:4688374‑M1/1‑8 (MQ=255)

                                                                                                                                              cgccgcTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgcaggtc      >  1:2956792‑M1/1‑8 (MQ=255)

                                                                                                                                               gccgcTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgcaggtcg     >  2:2672065‑M1/1‑7 (MQ=255)

                                                                                                                                                 cgcTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctccagttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcgctgcagcagctgggtgcgcaggtcgtt   >  1:1260310‑M1/1‑5 (MQ=255)

                                                                                                                                                  gcTGcgcgcacatcggcctgctccagggtttgtgcggcaattctctcctgttgcgcaggcgcgagccgggccatggcgggtgcggccaggggcgccagttgttcggcgatcatcttgccgcactgctgcagctgggtgcgcaggtcgttc  <  2:1606745‑M1/150‑147 (MQ=255)

AGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGCGCGAGCCGGGCCATGGCGGG  >  NC_002947/1844366‑1844661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`