New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 94121 | 42 (0.970) | 3 (0.070) | 3/240 | NT | 6.5% | coding (418/897 nt) | trpI | HTH‑type transcriptional regulator TrpI |
? | NC_002947 | = 94200 | 46 (1.120) | coding (497/897 nt) | trpI | HTH‑type transcriptional regulator TrpI |
ATGTGAGCGAGGCGCCATTCGTGCTGGGCTGCTCGGGCAGCCTGCTGGCGCGGTGGTTTATTCCGCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/93972‑94121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccgATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGGTCAAGGTCGCCCTCACCCGCCGACAGGTGCAAGCGCAGCTCAGGCAAATCCG < NC_002947/94200‑94056 ATGTGAGCGAGGCGCCATTCGTGCTGGGCTGCTCGGGCAGCCTGCTGGCGCGGTGGTTTATTCCGCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCG < 2:17250/150‑1 GCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCA > 1:472235/1‑150 TTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCG < 2:955136/150‑1 CTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGG < 2:472235/150‑1 GCCCGATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGGTCAAGGTCGCCCTCACCCGCCGACAGGTGCAAGCGCAGCTCAGGCAAATCCG > 1:50560/1‑150 ATGTGAGCGAGGCGCCATTCGTGCTGGGCTGCTCGGGCAGCCTGCTGGCGCGGTGGTTTATTCCGCGGCTGGGGCGGTTGCAGGCGGATTTGCCTGAGCTGCGCTTGCACCTGTCGGCGGGTGAGGGCGACCTTGACCCGCGGCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/93972‑94121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccgATGCATTCCTCGGCCAGCACATGCACCTGCATGTCCGCTGGCCACGGTGGCTCGGCATACACCAGCAACGCATCCAGCCCGGGCCGCCGCGGGTCAAGGTCGCCCTCACCCGCCGACAGGTGCAAGCGCAGCTCAGGCAAATCCG < NC_002947/94200‑94056 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |