New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	259838 =	52 (1.200)	3 (0.070)	3/238	NT	6.6%	coding (1372/1407 nt)	PP_0207	nitrate ABC transporter substrate‑binding protein
	?	NC_002947	259875 =	36 (0.890)					intergenic (+2/‑14)	PP_0207/PP_0208	nitrate ABC transporter substrate‑binding protein/nitrate ABC transporter permease

GCAGACCAAGGTCCATTTTCACGTTTGCCGCCACTTGCCAGAACAGCAGGCAGGCCAGCAGCGACGCCAGGCGCACCGGCCAGCGCTTGAGGTTGCGGGTCATGTCGGTGCCTCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/259991‑259838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgacCGGGAGGCACCGACATGACCCGCAACCTCAAGCGCTGGCCGGTGCGCCTGGCGTCGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTGGCGGCAAACGTGAAAATGGACCTTGGTCTGCTGACGTTCACCTATGTCCCTACACCCAAG  >  NC_002947/259875‑260020                                                                                                                                                                                                                                                                                                              GCAGACCAAGGTCCATTTTCACGTTTGCCGCCACTTGCCAGAACAGCAGGCAGGCCAGCAGCGACGCCAGGCGCACCGGCCAGCGCTTGAGGTTGCGGGTCATGTCGGTGCCTCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGC                                                                                                                                                        >  1:121860/1‑150                                                                                                                 TCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGACCGGGAGGCACCGACATGACCCGCAACCTCAAGCGCTGGCCGGTGCGCCTGGCGTCGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTGGCGGCAAACGTGAAAATGGACC                                        >  2:297766/1‑150                                                                                                                       TCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGACCGGGAGGCACCGACATGACCCGCAAC                                                                                                                          >  1:322657/1‑62                                                                                                                       TCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGACCGGGAGGCACCGACATGACCCGCAAC                                                                                                                          <  2:322657/62‑1                                                                                                                                                       TGACCGGGAGGCACCGACATGACCCGCAAACTCAAGCGATGGCCGGTGCGCCTGGCGTAGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTTGCGGCAAACGTGAAAATGGACCTTGGTCTGCTGACGTTCACCTATGTCCCTACACCCAAG  >  2:971824/1‑150                                                                                                                                                                                                                                                                                                              GCAGACCAAGGTCCATTTTCACGTTTGCCGCCACTTGCCAGAACAGCAGGCAGGCCAGCAGCGACGCCAGGCGCACCGGCCAGCGCTTGAGGTTGCGGGTCATGTCGGTGCCTCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/259991‑259838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgacCGGGAGGCACCGACATGACCCGCAACCTCAAGCGCTGGCCGGTGCGCCTGGCGTCGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTGGCGGCAAACGTGAAAATGGACCTTGGTCTGCTGACGTTCACCTATGTCCCTACACCCAAG  >  NC_002947/259875‑260020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.