New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 730706 | 46 (1.060) | 3 (0.070) | 3/242 | NT | 6.2% | coding (243/2565 nt) | clpB | chaperone protein ClpB |
? | NC_002947 | = 730725 | 47 (1.140) | coding (262/2565 nt) | clpB | chaperone protein ClpB |
CCGTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/730555‑730706 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgtgCCAAGTCCTGCGACATGTTCACGTCGCCGGTAGGGTTCTGTATTTTCGGCAGTTGGTCGAGCTCTTTCACCAGCCCCTGGCGCAGGCCATTGATGTCGAAGCCTACCTGCATCAGCAGCGGTTTGATGGAGCCGCCCTGCTGTTCGAG < NC_002947/730725‑730578 CCGTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACG > 2:418549/1‑150 GTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTG > 2:51213/1‑150 GGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTAGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGCCAAGTCCTGCGACATGTTCACGTCGCCGGTA < 2:1055676/150‑1 ACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGCCAAGTCCTGCGACATGTTCACGTC < 1:709175/102‑1 ACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGCCAAGTCCTGCGACATGTTCACGTC > 2:709175/1‑102 TGCCAAGTCCTGCGACATGTTCACGTCGCCGGTAGGGTTCTGTATTTTCGGCAGTTGGTCGAGCTCTTTCACCAGACCCTGGCGCAGGCCATTGATGTCGAAGCCTACCTGCATCAGCAGCGGTTTGATGGAGCCGCCCTGCTGTTCGAG < 1:64029/150‑1 CCGTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/730555‑730706 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgtgCCAAGTCCTGCGACATGTTCACGTCGCCGGTAGGGTTCTGTATTTTCGGCAGTTGGTCGAGCTCTTTCACCAGCCCCTGGCGCAGGCCATTGATGTCGAAGCCTACCTGCATCAGCAGCGGTTTGATGGAGCCGCCCTGCTGTTCGAG < NC_002947/730725‑730578 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |