New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 730706	46 (1.060)	3 (0.070)	3/242	NT	6.2%	coding (243/2565 nt)	clpB	chaperone protein ClpB
	?	NC_002947	= 730725	47 (1.140)					coding (262/2565 nt)	clpB	chaperone protein ClpB

TGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCAAGAAAGCGCTG  >  NC_002947/730576‑730871                                                                                                                                                      |                                                                                                                                                   tgctCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTgg                                                                                                                                                    >  1:1123713/1‑150 (MQ=255)   ctCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGAGAACAACAAGGGGCTCGACCAACTGCCGAAAATACAGAACCCTACGGGGGCAGTGGAAATGGCGCAGTGCGTGGCa                                                                                                                                                  >  1:1093065/1‑150 (MQ=255)   cTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGTCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGca                                                                                                                                                  <  1:64029‑M2/150‑3 (MQ=255)               ggcggcTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGTCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAAc                                                                                                                                      <  2:64029/150‑1 (MQ=255)               ggcggcTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAAc                                                                                                                                      <  1:51213/150‑1 (MQ=255)                 cggcTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCa                                                                                                                                    <  2:857659/150‑1 (MQ=255)                     tCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGTACCCTACCGGCGACGTGAACATGTCGCCGGACTTGGCACGTCTGCTTAACCAGGCa                                                                                                                                <  2:582835/150‑1 (MQ=255)                             aCCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCt                                                                                                                        <  1:49041/150‑1 (MQ=255)                                     tgATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCAcagc                                                                                                                <  2:970014/150‑1 (MQ=255)                                      gATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCAcag                                                                                                                 <  1:671908/148‑1 (MQ=255)                                      gATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCAcag                                                                                                                 >  2:671908/1‑148 (MQ=255)                                           agttAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAgg                                                                                                          <  2:130464/147‑1 (MQ=255)                                            ggTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAggg                                                                                                         >  1:175898/1‑150 (MQ=255)                                                 gCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGAcc                                                                                                    >  1:207455/1‑150 (MQ=255)                                                   ttCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCAGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAg                                                                                                  >  2:601565/1‑150 (MQ=255)                                                       aCATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCa                                                                                              >  1:1004767/1‑150 (MQ=255)                                                         aTCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCAtt                                                                                            >  2:147297/1‑150 (MQ=255)                                                         aTCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCAtt                                                                                            <  1:147297/150‑1 (MQ=255)                                                                 ccggcgcCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAAAATGTCGCAGGACTTGGCACGTCTGGTTAACCAGGCAGGCCGCAGTGCTCAGCAGAAGGGCGACCAGTTCATTTCCAGCGa                                                                                    <  1:933089/147‑1 (MQ=255)                                                                    gcgcCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCt                                                                                 <  2:1002499/150‑1 (MQ=255)                                                                          ggggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCt                                                                           <  2:692747/150‑1 (MQ=255)                                                                          ggggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCt                                                                           <  2:692242/150‑1 (MQ=255)                                                                          ggggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCt                                                                           >  2:1079346/1‑150 (MQ=255)                                                                           gggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTg                                                                          >  1:876436/1‑150 (MQ=255)                                                                             gCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGtt                                                                        <  2:207455/150‑1 (MQ=255)                                                                               tGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTgg                                                                      >  1:490947/1‑150 (MQ=255)                                                                                  tGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTGAGCGGGCAGAGCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGgccg                                                                   >  1:569306/1‑150 (MQ=255)                                                                                  tGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTgg                                                                      >  2:312479/1‑147 (MQ=255)                                                                                  tGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTgg                                                                      <  1:312479/147‑1 (MQ=255)                                                                                    aaaGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCa                                                                                        >  1:276527/1‑127 (MQ=255)                                                                                    aaaGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCa                                                                                        <  2:276527/127‑1 (MQ=255)                                                                                         ggtCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTAGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGAGCGACCAGTTCATTTCCAGCGAGCTGGTGCAGTTGGCCGCCATGGa                                                            >  2:518977/3‑150 (MQ=255)                                                                                             gACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGaa                                                        >  1:578799/1‑150 (MQ=255)                                                                                                cAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAAc                                                     <  2:725537/150‑1 (MQ=255)                                                                                                 aaCTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACa                                                    >  2:1098982/1‑150 (MQ=255)                                                                                                      ccGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAg                                               <  2:881486/150‑1 (MQ=255)                                                                                                            aTACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAAGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGc                                         >  2:862171/1‑150 (MQ=255)                                                                                                             tACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCa                                        >  2:467466/1‑150 (MQ=255)                                                                                                              aCAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCaa                                       >  2:853043/1‑150 (MQ=255)                                                                                                                       tACCGGCGACGTGAACATGTCGCAGGACTTGGcacgtcgccggtagggttctgtattttcggcagttggtctagctctttcaccagcccctggcgcaggccattgatgtcgaagcctacctgcatcagcagcggtttgatggagccgccc                              <  2:1055676‑M2/150‑119 (MQ=255)                                                                                                                       tACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAgctgctgct                              >  1:325387/1‑150 (MQ=255)                                                                                                                       tACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAgctgctgct                              >  1:77641/1‑150 (MQ=255)                                                                                                                              gACGTGAACATGTCGCAGGACTTGGcacgtcgccggtagggttctgtattttcggcagttggtcgagctctttcaccagcccctggcgcaggccattgatgt                                                                       <  1:709175‑M2/102‑78 (MQ=255)                                                                                                                              gACGTGAACATGTCGCAGGACTTGGcacgtcgccggtagggttctgtattttcggcagttggtcgagctctttcaccagcccctggcgcaggccattgatgt                                                                       >  2:709175‑M2/1‑25 (MQ=255)                                                                                                                               aCGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAgg                      <  2:992120/150‑1 (MQ=255)                                                                                                                                 gTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGc                    <  1:1021864/150‑1 (MQ=255)                                                                                                                                  tGAACATGTCGCAGGACTTGGCACGTCTGCTTCGCGAGGCAGACAGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTAGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCg                   >  1:820326/1‑150 (MQ=255)                                                                                                                                      cATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAg               <  2:656187/150‑1 (MQ=255)                                                                                                                                       aTGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGc              >  2:580640/1‑150 (MQ=255)                                                                                                                                       aTGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGc              >  1:944908/1‑150 (MQ=255)                                                                                                                                         gTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCaa            <  1:1116482/150‑1 (MQ=255)                                                                                                                                            gCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCAAGaa         <  2:896258/150‑1 (MQ=255)                                                                                                                                              aGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGGAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCAAGAAAg       >  2:711591/1‑150 (MQ=255)                                                                                                                                                  cTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCAAGAAAGCGCt   <  2:876436/150‑1 (MQ=255)                                                                                                                                                   ttGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCAAGAAAGCGCTg  <  2:210314/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCGTGAGCAAGAAAGCGCTG  >  NC_002947/730576‑730871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.