New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1176938 = | 53 (1.220) | 3 (0.070) | 3/238 | NT | 5.8% | coding (1363/1470 nt) | guaB | IMP dehydrogenase and single strand DNA binding factor |
? | NC_002947 | 1176967 = | 48 (1.180) | coding (1392/1470 nt) | guaB | IMP dehydrogenase and single strand DNA binding factor |
ACGCGGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTGCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1177092‑1176938 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcatCACCGGTGCCGGCATGGCCGAGTCCCACGTGCACGACGTGCAAATCACCAAAGAAGCCCCTAACTACCGCGTAGGCTGAGGCTTCCAGCTACAACATAAAGCGGGGCTGTCATGACAGCCCCGCGTCGTTTCCGATTTCCACT > NC_002947/1176967‑1177109 ACGCGGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGACTATCTTTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTG < 1:618700/150‑1 CGCGGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTGC > 2:355146/1‑150 CGCGGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTGC > 2:355171/1‑150 CGGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTGCGC > 2:903675/1‑150 GGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTGCGCA > 1:13167/1‑150 GGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCAAGTGGGAATAGGCCCTGACGGCACCCGGGAGTCGCACGAACGCCTGCTTGGTGCGCA > 2:560764/1‑150 CCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATGTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACCAAGCCGGAGTTCGTGCGCATCACCGGTGCCGGCAT < 1:603361/150‑1 GCGCACGAACTCCGGCTTGGTGCGCATCACCGGTGCCGGCATGGCCGAGTCCCACGTGCACGACGTGC < 1:951786/68‑1 GCGCACGAACTCCGGCTTGGTGCGCATCACCGGTGCCGGCATGGCCGAGTCCCACGTGCACGACGTGC > 2:951786/1‑68 TGCGCATCACCGGTGCCGGCATGGCCGAGTCCCACGTGCACGACGTGCACATCCACCAAGAAGCCCCTAACTCCGGCGTAGGCTGAGGCTTCCAGCTACAACATAAAGCGGGGCTGTCATGACAGCCCCGCGTCGTTTCCGATTTCCACT > 1:689429/1‑150 ACGCGGGGCTGTCATGACAGCCCCGCTTTATGTTGTAGCTGGAAGCCTCAGCCTACGCGGTAGTTAGGGGCTTCTTTGGTGATTTGCACGTCGTGCACGTGGGACTCGGCCATGCCGGCACCGGTGATGCGCACGAACTCCGGCTTGGTGCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1177092‑1176938 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcatCACCGGTGCCGGCATGGCCGAGTCCCACGTGCACGACGTGCAAATCACCAAAGAAGCCCCTAACTACCGCGTAGGCTGAGGCTTCCAGCTACAACATAAAGCGGGGCTGTCATGACAGCCCCGCGTCGTTTCCGATTTCCACT > NC_002947/1176967‑1177109 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |