| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1216187 = | 47 (1.080) | 4 (0.100) | 4/238 | NT | 8.2% | coding (778/4305 nt) | PP_1061 | ATP‑dependent DNA helicase |
| ? | NC_002947 | 1216232 = | 45 (1.110) | coding (733/4305 nt) | PP_1061 | ATP‑dependent DNA helicase | |||||
CGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1216238‑1216187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTTCC > NC_002947/1216232‑1216380 CGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCAGGTCACGCTTGCGGGCATGGCCGATAT > 1:284255/1‑79CGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCAGGTCACGCTTGCGGGCATGGCCGATAT < 2:284255/79‑1 GGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCC > 1:92064/1‑150 CCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGA < 2:92064/150‑1 GATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAG < 1:154552/150‑1 GCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGT < 2:110962/150‑1 CCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTT > 1:871714/1‑150 AGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTTCC < 2:292053/150‑1 CGTGACCTGGCCATCGAAGTGCCGCCGGTACCGCTGGGGGCGGTGATGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1216238‑1216187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTTCC > NC_002947/1216232‑1216380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |