New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1216187 =	47 (1.080)	4 (0.100)	4/238	NT	8.2%	coding (778/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1216232 =	45 (1.110)					coding (733/4305 nt)	PP_1061	ATP‑dependent DNA helicase

GTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAG  >  NC_002947/1216038‑1216334                                                                                                                                                      |                                                                                                                                                    ggaacgcctgcaagccttgtgcaaaaagccactgcggcgtatcggcctgtccgctacccaacgcccggtcgaacgggtggcacagtttctggtgggtagcgggcgtccctgcgccattgtcgatatcggccatgcccgcaagcgtgacct                                                                                                                                                     <  2:292053‑M1/1‑1 (MQ=255)  ggtgCGGCAACCGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATg                                                                                                                                                    <  2:808138/149‑1 (MQ=255)   aacgcctgcaagccttgtgcaaaaagccactgcggcgtatcggcctgtccgctacccaacgcccggtcgaacgggtggcacagtttctggtgggtagcgggcgtccctgcgccattgtcgatatcggccatgcccgcaagcgtgaccTgg                                                                                                                                                   >  1:871714‑M1/148‑150 (MQ=255)    acgcctgcaagccttgtgcaaaaagccactgcggcgtatcggcctgtccgctacccaacgcccggtcgaacgggtggcacagtttctggtgggtagcgggcgtccctgcgccattgtcgatatcggccatgcccgcaagcgtgaccTGGc                                                                                                                                                  <  2:110962‑M1/4‑1 (MQ=255)       ggCAACCGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCAt                                                                                                                                               <  1:260192/150‑1 (MQ=255)        gCAACCGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATc                                                                                                                                              >  2:928818/1‑150 (MQ=255)        ctgcaagccttgtgcaaaaagccactgcggcgtatcggcctgtccgctacccaacgcccggtcgaacgggtggcacagtttctggtgggtagcgggcgtccctgcgccattgtcgatatcggccatgcccgcaagcgtgaccTGGCCATc                                                                                                                                              <  1:154552‑M1/8‑1 (MQ=255)         cAACCGCCTCCTCGCCCAGCCGGTCGCGGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCTCAGACATCAATGGCCATCa                                                                                                                                             <  2:458115/150‑1 (MQ=255)            ccGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCg                                                                                                                                          >  2:154552/1‑150 (MQ=255)             cGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGc                                                                                                                                         <  1:147022/150‑1 (MQ=255)             cGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGc                                                                                                                                         >  1:27974/1‑150 (MQ=255)                                tCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCggcggc                                                                                                                      <  2:816181/150‑1 (MQ=255)                                          tcggcctgtccgctacccaacgcccggtcgaacgggtggcacagtttctggtgggtagcgggcgtccctgcgccattgtcgatatcggccatgcccgcaagcgtgaccTGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATgg                                                                                                            <  2:92064‑M1/42‑1 (MQ=255)                                            ggcctgtccgctacccaacgcccggtcgaacgggtggcacagtttctggtgggtagcgggcgtccctgcgccattgtcgatatcggccatgcccgcaagcgtgaccTGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGcc                                                                                                          >  1:92064‑M1/107‑150 (MQ=255)                                                   tACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCAc                                                                                                   <  2:1120545/150‑1 (MQ=255)                                                      gTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCt                                                                                                >  2:1000120/1‑150 (MQ=255)                                                      gTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTATTATACCAGGCCCAAGCCACCACTGCAAAATACGGCCCGCATCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCt                                                                                                >  1:248277/1‑150 (MQ=255)                                                      gTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTCCCCGGGCAAGGGTGGCCAAGCGGGCATACACCAGGCCCCAGACATCAATGGCCATCACAGCCCCCAGCGAAACCGGCTGCACTGCGATGGGCATGTCACGCt                                                                                                >  2:239395/1‑150 (MQ=255)                                                          ggCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACAACAGGCCCCAGACATCAATGGCCATCAACGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCg                                                                                            <  2:12492/150‑1 (MQ=255)                                                           gCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCCTACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGCACCCGCGGCACTTCGATGGCCAGGTCCCCCTTGCgg                                                                                           >  2:379948/1‑150 (MQ=255)                                                           gCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCgg                                                                                           <  1:928818/150‑1 (MQ=255)                                                            ccAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCggg                                                                                          <  1:340386/150‑1 (MQ=255)                                                                     gggTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCAGACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGa                                                                                 <  1:12616/150‑1 (MQ=255)                                                                          ttGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCg                                                                            >  1:185830/1‑150 (MQ=255)                                                                              cGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACaa                                                                        <  2:185830/150‑1 (MQ=255)                                                                               gAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAAt                                                                       <  1:222980/150‑1 (MQ=255)                                                                                aaTACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATg                                                                      <  2:863060/150‑1 (MQ=255)                                                                                     cAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCa                                                                 >  1:451179/1‑150 (MQ=255)                                                                                       gCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAgg                                                               <  2:1094272/150‑1 (MQ=255)                                                                                               cGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCg                                                       >  1:87033/1‑150 (MQ=255)                                                                                                  tgtTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTa                                                    >  1:144693/1‑150 (MQ=255)                                                                                                    ttCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTAcc                                                  <  2:602136/150‑1 (MQ=255)                                                                                                      cACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACcca                                                <  2:446962/150‑1 (MQ=255)                                                                                                         gggCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACccacca                                             >  1:9916/1‑150 (MQ=255)                                                                                                              aGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAAc                                        <  1:1000120/150‑1 (MQ=255)                                                                                                               gggTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACt                                       <  2:27974/150‑1 (MQ=255)                                                                                                                ggTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCGTCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACtg                                      >  2:718350/1‑150 (MQ=255)                                                                                                                    gCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGcc                                  >  1:918459/1‑150 (MQ=255)                                                                                                                     ccAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCCGGGACGCCCGCTACCCACCAGAAACTGTGCCa                                 >  1:273721/1‑150 (MQ=255)                                                                                                                      cAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCAc                                >  2:344223/1‑150 (MQ=255)                                                                                                                      cAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTAACGGCGGCACTTCGATGGCAAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCAc                                <  1:243054/150‑1 (MQ=255)                                                                                                                         gCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACcggcgg                                                                                                                       >  2:832864/1‑60 (MQ=255)                                                                                                                         gCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACcggcgg                                                                                                                       <  1:832864/60‑1 (MQ=255)                                                                                                                           atatcggccatgcccgcaagcgtgaccTGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACg                                                                                                  >  1:284255‑M1/28‑79 (MQ=255)                                                                                                                           atatcggccatgcccgcaagcgtgaccTGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACg                                                                                                  <  2:284255‑M1/52‑1 (MQ=255)                                                                                                                               aTACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGAc                       >  1:293599/1‑150 (MQ=255)                                                                                                                                tACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGAcc                      >  1:412019/1‑150 (MQ=255)                                                                                                                                  cacCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCgg                    <  1:125416/150‑1 (MQ=255)                                                                                                                                   acCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCggg                   >  2:750455/1‑150 (MQ=255)                                                                                                                                     cAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCg                 >  1:292053/1‑150 (MQ=255)                                                                                                                                          cccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACccacca                                             <  2:1074357/117‑1 (MQ=255)                                                                                                                                          cccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACccacca                                             >  1:1074357/1‑117 (MQ=255)                                                                                                                                          cccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTggg            <  2:144693/150‑1 (MQ=255)                                                                                                                                           ccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGt           >  2:345940/1‑150 (MQ=255)                                                                                                                                           ccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGCTGGGt           >  2:56494/1‑150 (MQ=255)                                                                                                                                              gACATCAATGGCCATCAGCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGc        <  1:379948/150‑1 (MQ=255)                                                                                                                                                    aaTGGACATCAAAGCACCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCCCTACCAACCAGAAACTATGCCACCCGGTCGACCGGGCGCTGGGTAGCGGACaa  >  2:449348/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCTGAGGTGGCGGGTGATACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAG  >  NC_002947/1216038‑1216334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.