New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1419697 = | 21 (0.480) | 3 (0.070) | 3/240 | NT | 8.7% | coding (323/366 nt) | PP_1244 | hypothetical protein |
? | NC_002947 | 1419800 = | 43 (1.050) | coding (220/366 nt) | PP_1244 | hypothetical protein |
GTCCAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1419851‑1419697 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttgcaCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAA > NC_002947/1419800‑1419943 GTCCAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAG > 1:846341/1‑150 TCCAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGT > 2:48851/1‑150 CCAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTT < 1:41510/150‑1 CCAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTT < 1:41581/150‑1 CAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGGTGCAGTTt > 2:922931/1‑149 AGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGC < 1:1032755/150‑1 GTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCA < 2:1054842/150‑1 CCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG > 1:581869/1‑150 CGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCCGAGTACGTACTCTGAGG > 2:1085896/1‑150 AGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAA < 2:581869/150‑1 GTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAA < 2:917305/150‑1 CACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATAAGGGACCATCTTGC > 1:663330/1‑110 CACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATAAGGGACCATCTTGC < 2:663330/110‑1 GTCCAGTCCTCAGAGTACGTACTCTGCGCCCTGTCCGTGGCCCGCCAATCCGTGCAACTCAAACCCACCGCCCACAGCTCGATCGTGATGCAGGCCGTGATCCATGAAATGGAAGCGGTACAGGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1419851‑1419697 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttgcaCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAA > NC_002947/1419800‑1419943 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |