New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1419697 = | 21 (0.480) | 3 (0.070) | 3/240 | NT | 8.7% | coding (323/366 nt) | PP_1244 | hypothetical protein |
? | NC_002947 | 1419800 = | 43 (1.050) | coding (220/366 nt) | PP_1244 | hypothetical protein |
CTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAA > NC_002947/1419651‑1419943 | cTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCAc > 1:372436/1‑150 (MQ=255) cTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACCGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCAc < 1:1080767/150‑1 (MQ=255) cctcagagtacgtactcggcgccctgtccgtggcccgccaatccgTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACg > 2:1085896‑M1/46‑150 (MQ=255) gCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCACCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACgg > 2:210634/1‑150 (MQ=255) ctcagagtacgtactctgcgccctgtccgtggcccgccaatccgTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACgg > 1:581869‑M1/45‑150 (MQ=255) cgCAAGGTGTGAGGCTCTGTGGGTAAATGCGCCCGCATCTGCAACTGCATCAACGCCGTCTCGACCTGCCCCTGTACCGCTTCCATTTTATGTATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTgg < 2:428137/149‑1 (MQ=255) aGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACggg > 2:983237/1‑149 (MQ=255) gCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACGTTCTCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACa > 1:922931/1‑150 (MQ=255) tgGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGgcgc > 2:589283/1‑150 (MQ=255) gTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCaga < 1:730499/150‑1 (MQ=255) gTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCaga > 2:825191/1‑150 (MQ=255) ccGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGACTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTActc > 1:614073/1‑150 (MQ=255) cATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGCACGTACTCTgc < 1:589283/150‑2 (MQ=255) ccgtgcaactcaaacccaccgcccacagctcgatcgtgatgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcaCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAg > 1:581869‑M2/107‑150 (MQ=255) aTCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAg < 1:270483/150‑1 (MQ=255) tCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGa > 2:663168/1‑148 (MQ=255) tCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGa < 1:663168/148‑1 (MQ=255) cgtgcaactcaaacccaccgcccacagctcgatcgtgatgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcaCGGATTGGCGGGCCACGGACAGGGCGCCGAGTACGTACTCTGAg‑g > 2:1085896‑M2/106‑150 (MQ=255) TGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GAc < 2:1054842‑M1/150‑1 (MQ=255) GCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACt < 1:1032755‑M1/150‑1 (MQ=255) aAACTGCACCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTg > 2:922931‑M1/2‑150 (MQ=255) AACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTgg < 1:41581‑M1/150‑1 (MQ=255) AACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTgg < 1:41510‑M1/150‑1 (MQ=255) ACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGa > 2:48851‑M1/1‑150 (MQ=255) CTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGAc > 1:846341‑M1/1‑150 (MQ=255) gACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACTGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGc > 2:917970/1‑150 (MQ=255) aCTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCa < 1:210634/150‑1 (MQ=255) cTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACTGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAg < 1:917970/150‑1 (MQ=255) cTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAg < 1:1054842/150‑1 (MQ=255) tCGACCGGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAgg > 1:339648/1‑150 (MQ=255) tCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAgg > 1:917305/1‑150 (MQ=255) tCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGGGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACACTGAG‑GACTGGACCAGAGTGTCTTGCAgg > 1:378153/1‑150 (MQ=255) agctcgatcgtgatgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcaCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGaa < 2:581869‑M2/70‑1 (MQ=255) ccAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACt > 1:75755/1‑150 (MQ=255) gCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTggg > 2:330633/1‑150 (MQ=255) gCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTggg > 2:332545/1‑150 (MQ=255) tCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGt < 2:181195/150‑1 (MQ=255) cATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTAGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGGACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGAGGTATCGAGGGGTgg > 2:40611/1‑150 (MQ=255) tttCATGGATCACGGCCTGCATCCCGATCGAGCTGTGGGCGGTGGGGTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACCGGGTGGTATCGAGGGGTGGAt > 2:562938/1‑150 (MQ=255) aTGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAgg < 2:312445/150‑1 (MQ=255) tGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAggg > 2:848231/1‑150 (MQ=255) gATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGAc < 2:75755/150‑1 (MQ=255) tCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCa > 1:779187/1‑150 (MQ=255) aCGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAgta > 2:93467/1‑79 (MQ=255) aCGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAgta < 1:93467/79‑1 (MQ=255) gCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTg < 2:779187/150‑1 (MQ=255) cTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTgcg < 2:41581/150‑1 (MQ=255) cTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTgcg < 2:41510/150‑1 (MQ=255) gATNGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGCGTCTTTCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACAt > 2:704626/1‑150 (MQ=255) gATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCCGAGTACGATGTGTGAGCCACAGG‑CATAAGCCGCTGGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACAt > 1:78826/1‑150 (MQ=255) gCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCa < 1:160087/92‑1 (MQ=255) gCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCa > 2:160087/1‑92 (MQ=255) gCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAg > 2:663443/1‑150 (MQ=255) cTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGTTGGATCAGGGACCATCTTGCGCATAAACATCTCCAgg < 1:330633/150‑1 (MQ=255) cTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGTTGGATCAGGGACCATCTTGCGCATAAACATCTCCAgg < 1:332545/150‑1 (MQ=255) cTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGAcc < 2:926025/126‑1 (MQ=255) cTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGAcc > 1:926025/1‑126 (MQ=255) gTGGGTTTGAGTTGCACGGATTGGCGGGCCCCGGACAGTGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGa < 2:261401/150‑1 (MQ=255) gttgcaCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCaa < 2:917305‑M2/144‑1 (MQ=255) caCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATAAGGGACCATCTTgc > 1:663330‑M2/3‑110 (MQ=255) caCGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATAAGGGACCATCTTgc < 2:663330‑M2/108‑1 (MQ=255) | CTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTTGCACGGATTGGCGGGCCACGGACAGGGCGCAGAGTACGTACTCTGAG‑GACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAA > NC_002947/1419651‑1419943 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |