| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1483154 | 35 (0.810) | 4 (0.100) | 4/246 | NT | 11.0% | coding (321/1029 nt) | yhdW | amino acid ABC transporter‑binding protein YhdW |
| ? | NC_002947 | = 1483186 | 31 (0.740) | coding (353/1029 nt) | yhdW | amino acid ABC transporter‑binding protein YhdW | |||||
GATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1483004‑1483154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA < NC_002947/1483186‑1483039 agacaTCGGCATCGATGCCGACGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCAC > 2:558876/6‑150GATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCAC > 2:178476/1‑150 CACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGG < 1:628657/125‑1 CACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGG > 2:628657/1‑125 CAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACC > 1:975653/1‑72 CAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACC < 2:975653/72‑1 ACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCGCCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTG > 1:1130836/1‑91 ACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCGCCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTG < 2:1130836/91‑1 ACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCC > 1:427685/1‑150 ACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCC > 1:822850/1‑150 CCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGGACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA > 1:1024008/1‑150 GATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1483004‑1483154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA < NC_002947/1483186‑1483039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |