New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2248271 | 35 (0.810) | 3 (0.070) | 3/244 | NT | 7.2% | coding (1371/3297 nt) | PP_1983 | PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
? | NC_002947 | = 2248318 | 44 (1.060) | coding (1324/3297 nt) | PP_1983 | PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
GTGATCAGGCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2248119‑2248271 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGAGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA < NC_002947/2248318‑2248170 GTGATCAGGCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCG > 2:494096/1‑150 GCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGT > 2:896049/1‑150 GAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGTTCACCCAGACCTTCGGCTGGAGCAGCGCTCAGCTGCTTTGGCTTACCGC < 2:831105/150‑1 TACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCGTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGA < 1:896049/150‑1 GTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGCGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA > 2:934019/1‑150 GTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGAGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA > 1:791428/1‑150 GTGATCAGGCGGCTGGAAATCACACAGGTCAGCGGGTCGCCATTGCGGTGGTTGAGTACCACGGCGACGTTACTCAAGGCCTGTTCGCGGATCACCTGCTCGATACGTTTCGCGCGCTCGACGGACTCGGCCCACAGGCCGATTTCCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2248119‑2248271 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTCACCCAGACCTTCGGCTGGAGCAGCGCGCAGGTGCTTGGGCGTACCGCCGAGGAAATCGGCCTGTGGGCCGAGTCCGTCGAGCGCGCGAAACGTATCGAGCAGGTGATCCGCGAACAGGCCTTGAGTAACGTCGCCGTGGTACTCAA < NC_002947/2248318‑2248170 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |